Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | L2Z43_RS03970 | Genome accession | NZ_CP091334 |
| Coordinates | 852533..853639 (-) | Length | 368 a.a. |
| NCBI ID | WP_001187342.1 | Uniprot ID | A0ABX6CGL8 |
| Organism | Acinetobacter baumannii strain ATCC19606-VUB | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 847533..858639
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z43_RS03940 (L2Z43_03940) | - | 847652..849238 (+) | 1587 | WP_000622648.1 | cytochrome ubiquinol oxidase subunit I | - |
| L2Z43_RS03945 (L2Z43_03945) | cydB | 849235..850380 (+) | 1146 | WP_000575167.1 | cytochrome d ubiquinol oxidase subunit II | - |
| L2Z43_RS03950 (L2Z43_03950) | cydX | 850394..850495 (+) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| L2Z43_RS03955 (L2Z43_03955) | - | 850496..850795 (+) | 300 | WP_086221468.1 | cyd operon YbgE family protein | - |
| L2Z43_RS03960 (L2Z43_03960) | - | 850853..851524 (-) | 672 | WP_000175347.1 | DUF2057 domain-containing protein | - |
| L2Z43_RS03965 (L2Z43_03965) | - | 851748..852344 (-) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| L2Z43_RS03970 (L2Z43_03970) | pilA | 852533..853639 (-) | 1107 | WP_001187342.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| L2Z43_RS03975 (L2Z43_03975) | - | 853747..854073 (-) | 327 | WP_000955082.1 | hypothetical protein | - |
| L2Z43_RS03980 (L2Z43_03980) | - | 854174..854533 (-) | 360 | WP_000185571.1 | hypothetical protein | - |
| L2Z43_RS03985 (L2Z43_03985) | - | 854749..854982 (+) | 234 | WP_000616034.1 | hypothetical protein | - |
| L2Z43_RS03990 (L2Z43_03990) | - | 855220..855594 (+) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| L2Z43_RS03995 (L2Z43_03995) | - | 855735..856166 (+) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| L2Z43_RS04000 (L2Z43_04000) | - | 856217..857425 (-) | 1209 | WP_000129948.1 | aspartate aminotransferase family protein | - |
| L2Z43_RS04005 (L2Z43_04005) | grxD | 857653..857994 (+) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| L2Z43_RS04010 (L2Z43_04010) | - | 858041..858364 (-) | 324 | WP_000121846.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39919.72 Da Isoelectric Point: 4.9872
>NTDB_id=558538 L2Z43_RS03970 WP_001187342.1 852533..853639(-) (pilA) [Acinetobacter baumannii strain ATCC19606-VUB]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=558538 L2Z43_RS03970 WP_001187342.1 852533..853639(-) (pilA) [Acinetobacter baumannii strain ATCC19606-VUB]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCTTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTTGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGCGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCTTTGCAAGAAGAGTTGGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGACAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTTGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGCGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |