Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | L2Z44_RS05620 | Genome accession | NZ_CP091333 |
| Coordinates | 1197899..1199005 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187342.1 | Uniprot ID | A0ABX6CGL8 |
| Organism | Acinetobacter baumannii strain DSM30011-VUB | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1192899..1204005
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z44_RS05580 (L2Z44_05580) | - | 1192976..1193299 (+) | 324 | WP_000121846.1 | hypothetical protein | - |
| L2Z44_RS05585 (L2Z44_05585) | grxD | 1193346..1193687 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| L2Z44_RS05590 (L2Z44_05590) | - | 1193915..1195123 (+) | 1209 | WP_000129946.1 | aspartate aminotransferase family protein | - |
| L2Z44_RS05595 (L2Z44_05595) | - | 1195174..1195605 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| L2Z44_RS05600 (L2Z44_05600) | - | 1195746..1196120 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| L2Z44_RS05605 (L2Z44_05605) | - | 1196556..1196789 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| L2Z44_RS05610 (L2Z44_05610) | - | 1197005..1197364 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| L2Z44_RS05615 (L2Z44_05615) | - | 1197465..1197791 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| L2Z44_RS05620 (L2Z44_05620) | pilA | 1197899..1199005 (+) | 1107 | WP_001187342.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| L2Z44_RS05625 (L2Z44_05625) | - | 1199194..1199790 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| L2Z44_RS05630 (L2Z44_05630) | - | 1200016..1200687 (+) | 672 | WP_075400175.1 | DUF2057 domain-containing protein | - |
| L2Z44_RS05635 (L2Z44_05635) | - | 1200760..1201284 (+) | 525 | WP_002157656.1 | GNAT family N-acetyltransferase | - |
| L2Z44_RS05640 (L2Z44_05640) | - | 1201297..1201596 (-) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| L2Z44_RS05645 (L2Z44_05645) | cydX | 1201597..1201698 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| L2Z44_RS05650 (L2Z44_05650) | cydB | 1201712..1202857 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39919.72 Da Isoelectric Point: 4.9872
>NTDB_id=558465 L2Z44_RS05620 WP_001187342.1 1197899..1199005(+) (pilA) [Acinetobacter baumannii strain DSM30011-VUB]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=558465 L2Z44_RS05620 WP_001187342.1 1197899..1199005(+) (pilA) [Acinetobacter baumannii strain DSM30011-VUB]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGTATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACCTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCATTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACTACTATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTTGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTAATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCTGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CAGGACAAAATGCAATCAACCAAGTACAAGAATTTGATCAAGCTGTCGGTTTAACAGGTATTACTATTACTAAGCTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCATTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGTATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACCTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCATTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACTACTATTGGTAAGTTGGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTTGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTAATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCTGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CAGGACAAAATGCAATCAACCAAGTACAAGAATTTGATCAAGCTGTCGGTTTAACAGGTATTACTATTACTAAGCTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCATTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |