Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   KCV10_RS05950 Genome accession   NZ_CP073243
Coordinates   1295297..1295623 (-) Length   108 a.a.
NCBI ID   WP_002053185.1    Uniprot ID   A0A0A7XV72
Organism   Acinetobacter seifertii strain S63-3     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1290297..1300623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV10_RS05930 - 1290402..1291028 (-) 627 WP_077165227.1 FHA domain-containing protein -
  KCV10_RS05935 gspD 1291069..1293345 (-) 2277 WP_212512001.1 type II secretion system secretin GspD -
  KCV10_RS05940 - 1293387..1294223 (-) 837 WP_049065293.1 type II secretion system protein N -
  KCV10_RS05945 gspN 1294223..1294966 (-) 744 WP_004699190.1 type II secretion system protein N -
  KCV10_RS05950 hns 1295297..1295623 (-) 327 WP_002053185.1 H-NS family nucleoid-associated regulatory protein Regulator
  KCV10_RS05955 - 1295817..1296257 (-) 441 WP_004699193.1 acyl-CoA thioesterase -
  KCV10_RS05960 - 1296265..1297458 (-) 1194 WP_212512002.1 heme biosynthesis protein HemY -
  KCV10_RS05965 - 1297468..1298307 (-) 840 WP_191102354.1 hypothetical protein -
  KCV10_RS05970 - 1298316..1299083 (-) 768 WP_151749455.1 uroporphyrinogen-III synthase -
  KCV10_RS05975 hemC 1299088..1300005 (-) 918 WP_191102561.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12478.12 Da        Isoelectric Point: 5.0524

>NTDB_id=558439 KCV10_RS05950 WP_002053185.1 1295297..1295623(-) (hns) [Acinetobacter seifertii strain S63-3]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNSE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=558439 KCV10_RS05950 WP_002053185.1 1295297..1295623(-) (hns) [Acinetobacter seifertii strain S63-3]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTCAGTGTTGAACAACTTC
TTGAGTTTGGTGCTCAAAAACGTAAGAAAACTACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATTCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7XV72

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

99.074

100

0.991