Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   KCV09_RS10855 Genome accession   NZ_CP073241
Coordinates   2356114..2357256 (+) Length   380 a.a.
NCBI ID   WP_212515118.1    Uniprot ID   -
Organism   Acinetobacter soli strain M3-1-68     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2351114..2362256
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV09_RS10830 - 2351243..2352448 (+) 1206 WP_212515116.1 oxygenase MpaB family protein -
  KCV09_RS16490 - 2352647..2352787 (-) 141 Protein_2102 hypothetical protein -
  KCV09_RS10840 - 2352863..2354854 (-) 1992 WP_212515117.1 TonB-dependent copper receptor -
  KCV09_RS10845 - 2354957..2355388 (-) 432 WP_004941507.1 DUF2946 family protein -
  KCV09_RS10850 def 2355470..2355994 (-) 525 WP_004944209.1 peptide deformylase -
  KCV09_RS10855 tsaP 2356114..2357256 (+) 1143 WP_212515118.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  KCV09_RS10860 dprA 2357278..2358429 (+) 1152 WP_119026566.1 DNA-processing protein DprA Machinery gene
  KCV09_RS10865 - 2358469..2359041 (+) 573 WP_004941519.1 L-threonylcarbamoyladenylate synthase -
  KCV09_RS10870 - 2359544..2360452 (-) 909 WP_048763958.1 outer envelope protein -
  KCV09_RS10875 - 2360761..2361702 (-) 942 WP_004941523.1 LysR substrate-binding domain-containing protein -

Sequence

Protein


Download         Length: 380 a.a.        Molecular weight: 42053.23 Da        Isoelectric Point: 7.8546

>NTDB_id=558405 KCV09_RS10855 WP_212515118.1 2356114..2357256(+) (tsaP) [Acinetobacter soli strain M3-1-68]
MNMVLNGLRTFSHLGLKQYGFALAICGVVGISNAEAATRNHNPPSLKAGAPHVYVVKKGDTLWDISGKFLKKPWRWPEIW
ASNKHVKNPHWIYPGDRLLLCTLNGQPLVGRDMGDGCEGIIRRYTGRTTLPPQVRIEELKNSIPVIPLSQIQQWLERSTL
VSADAIESVPYVVGTTDQRVLAAKGQKIFVRGQGLQNGQRYAIYHEGEPYTALDEHGKKRILAVELIQVASGIAVQSEQE
ITTLELTDTYNAETRRGDLVMPEQDAMLPTLFYPTEGNEMVAGGKIVRVMGSIATAARNSVVTLNRGLNQGAKVGQVLDI
YAQGESVKDPKTHELIKLPNQNIGSLMIFKTFDEFSYAYVLESNLPIKVGAEIRPPQDEE

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=558405 KCV09_RS10855 WP_212515118.1 2356114..2357256(+) (tsaP) [Acinetobacter soli strain M3-1-68]
ATGAACATGGTTTTAAACGGCTTACGCACGTTTTCTCATTTGGGGCTTAAACAATACGGTTTCGCGCTGGCCATCTGTGG
TGTAGTGGGCATATCGAATGCCGAAGCTGCAACGCGCAATCACAATCCACCCTCACTCAAGGCAGGTGCACCGCATGTCT
ATGTGGTCAAAAAAGGGGATACGCTTTGGGATATTTCTGGAAAATTTTTAAAAAAACCATGGCGATGGCCAGAGATCTGG
GCCAGTAACAAACATGTGAAGAATCCACACTGGATTTATCCAGGCGACCGATTGCTGCTGTGTACGCTCAATGGTCAACC
GCTCGTTGGACGAGATATGGGGGATGGCTGTGAAGGAATTATTCGTCGTTATACAGGCCGCACCACCTTACCCCCACAAG
TTCGCATTGAAGAATTAAAAAATAGTATTCCAGTGATTCCGCTGAGCCAAATTCAGCAATGGCTGGAGCGCTCGACACTT
GTATCGGCGGACGCTATTGAGTCTGTGCCTTATGTTGTGGGCACCACCGATCAACGTGTACTGGCTGCCAAAGGTCAAAA
AATCTTTGTGCGGGGTCAGGGCCTACAAAATGGTCAGCGTTATGCGATCTATCATGAGGGTGAGCCCTACACCGCCCTAG
ATGAACACGGCAAAAAGCGCATTCTGGCCGTCGAACTGATTCAGGTGGCTTCGGGGATTGCAGTGCAATCTGAACAAGAG
ATCACCACGCTCGAACTCACCGACACCTATAACGCAGAAACACGTCGTGGCGATTTGGTCATGCCAGAGCAAGATGCCAT
GTTACCAACATTGTTTTATCCAACCGAAGGCAATGAAATGGTGGCAGGTGGCAAGATTGTTCGTGTTATGGGCTCTATTG
CCACAGCAGCACGCAATAGTGTCGTGACGCTTAATCGAGGCTTGAATCAAGGTGCCAAAGTAGGACAAGTACTCGATATT
TATGCGCAAGGCGAAAGCGTCAAAGACCCGAAAACGCATGAACTGATCAAACTTCCGAATCAAAATATTGGAAGTTTGAT
GATATTTAAAACCTTTGATGAATTCAGTTACGCTTACGTACTCGAGAGCAACTTACCCATTAAAGTCGGGGCAGAAATTC
GCCCTCCTCAAGATGAAGAATAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(54-99)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

67.717

100

0.679