Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   KCV09_RS10610 Genome accession   NZ_CP073241
Coordinates   2300879..2302447 (+) Length   522 a.a.
NCBI ID   WP_151809375.1    Uniprot ID   -
Organism   Acinetobacter soli strain M3-1-68     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2295879..2307447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV09_RS10590 - 2296381..2297682 (+) 1302 WP_004932270.1 homoserine dehydrogenase -
  KCV09_RS10595 thrC 2297743..2298882 (+) 1140 WP_004944129.1 threonine synthase -
  KCV09_RS10600 pbpG 2298949..2300007 (-) 1059 WP_004932264.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  KCV09_RS10605 - 2300221..2300856 (+) 636 WP_004932261.1 response regulator -
  KCV09_RS10610 pilS 2300879..2302447 (+) 1569 WP_151809375.1 PAS domain-containing sensor histidine kinase Regulator
  KCV09_RS10615 pilR 2302475..2303893 (+) 1419 WP_151814948.1 sigma-54 dependent transcriptional regulator Regulator
  KCV09_RS10620 - 2303895..2305070 (-) 1176 WP_151814949.1 S41 family peptidase -
  KCV09_RS10625 gpmI 2305083..2306630 (-) 1548 WP_151814950.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 58707.12 Da        Isoelectric Point: 6.9013

>NTDB_id=558402 KCV09_RS10610 WP_151809375.1 2300879..2302447(+) (pilS) [Acinetobacter soli strain M3-1-68]
MPAPALSTQLSYTIYRLGAWYGAYRVIIGLSLILIFYTTGQGHSSDYLHPELYVFTLVIYTLLSFMQGGVFKFSTRWIAS
QLTLLFIVDIVVLSLLTYAVGSPSLHLSMLYVVTVFSAAILLQARMSLTVTLLAVIVVIYQQVVLVLFDKDHLSSISNSI
LLAFLFFVVYGIGQIAVRRFQLLENIANHQSDVLNQLQNINRYILDQAKEGYLVLDESYHVVVCNPAASSFLGIQPLFAH
EQLPLVNLQPDLVEVLRSTSLQDGETFNFESQFSTYRLHVRIQRLRVPQQSLILLILQDAQRMNQRVQQLKLAALGQLSA
SIAHEIRNPLAAIAQANELLSDSELHEQQQLQNMIRKQTKRINGIIEDTLGMARNQTTTPITIQLNPFLKSLLHEDLNDV
QQKLELQLPAHDVSIVFDPSQLRQVLVNLIRNALRHNAPEAPAVQIVVQLASTSIWIDIVDFGEGVTKRNLSQLFKPFFS
TEIQGTGLGLYLSQSLCEANHAKLTYVEQDKGACFRIHCPIN

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=558402 KCV09_RS10610 WP_151809375.1 2300879..2302447(+) (pilS) [Acinetobacter soli strain M3-1-68]
ATGCCGGCGCCTGCTCTGTCTACCCAGCTGTCGTATACGATTTATCGTCTAGGCGCTTGGTATGGTGCTTATCGTGTCAT
TATTGGCTTAAGCCTGATTCTGATCTTTTACACCACAGGTCAGGGTCACAGCTCAGACTATTTACATCCCGAACTTTACG
TTTTTACACTGGTGATTTACACCTTGCTCAGCTTTATGCAAGGTGGAGTATTTAAATTCTCTACACGATGGATTGCCTCA
CAGCTCACCTTGCTGTTTATTGTCGACATTGTGGTACTGAGTTTACTCACCTACGCCGTGGGCAGCCCAAGTCTGCACTT
GAGCATGCTGTACGTGGTGACGGTATTTTCGGCGGCGATTTTGCTGCAAGCACGAATGTCACTGACCGTTACACTTCTCG
CGGTCATTGTGGTGATCTATCAGCAAGTGGTGTTGGTCCTGTTTGACAAAGACCATCTCAGCTCGATCAGCAACAGTATT
TTGCTGGCTTTTTTATTTTTTGTGGTTTACGGAATTGGGCAAATCGCGGTGCGACGTTTTCAGTTACTTGAGAACATTGC
CAATCATCAATCTGACGTACTCAATCAACTCCAAAATATCAATCGTTATATTCTAGATCAGGCCAAAGAGGGTTATCTGG
TACTCGACGAAAGTTATCATGTTGTGGTGTGTAATCCCGCAGCGTCGAGTTTTTTAGGCATACAGCCGCTTTTTGCGCAT
GAACAATTGCCATTGGTGAATCTTCAGCCAGACTTAGTTGAAGTGCTCAGATCGACCTCGCTGCAAGATGGTGAAACATT
CAATTTTGAATCACAGTTTTCGACTTATCGTCTTCATGTGCGTATTCAGCGTTTACGGGTTCCGCAACAATCCTTAATCT
TGTTGATCTTGCAAGACGCTCAAAGAATGAATCAACGTGTTCAGCAGTTAAAACTTGCCGCATTGGGGCAACTCTCGGCC
AGTATTGCCCATGAAATTCGCAATCCTTTGGCTGCAATTGCCCAAGCCAATGAATTACTGTCCGATAGTGAACTGCATGA
GCAGCAGCAATTGCAGAACATGATCAGAAAACAAACCAAACGGATCAATGGCATTATTGAAGATACGCTCGGGATGGCGC
GTAATCAGACCACCACCCCAATCACCATCCAGCTCAATCCGTTTTTAAAGAGTTTACTGCACGAAGACTTAAATGATGTA
CAGCAGAAATTAGAACTTCAGCTCCCAGCACACGATGTATCGATTGTGTTTGATCCGTCTCAACTCCGGCAAGTGCTGGT
CAATCTGATTCGAAATGCACTTCGTCACAATGCACCAGAAGCACCCGCAGTACAGATTGTGGTGCAGTTGGCATCGACTT
CGATCTGGATTGATATTGTCGATTTTGGTGAGGGCGTAACAAAACGTAATCTTTCGCAACTGTTTAAACCGTTTTTTAGT
ACCGAAATTCAGGGAACTGGTTTAGGATTGTATTTATCACAGAGTCTTTGCGAGGCGAATCATGCCAAGCTGACCTATGT
TGAACAAGATAAAGGGGCATGCTTTAGAATCCACTGCCCAATAAATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(314-377)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(418-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

60.271

98.851

0.596