Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   KCV09_RS09970 Genome accession   NZ_CP073241
Coordinates   2158412..2160643 (+) Length   743 a.a.
NCBI ID   WP_212515767.1    Uniprot ID   -
Organism   Acinetobacter soli strain M3-1-68     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2153412..2165643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV09_RS09945 - 2153476..2154315 (+) 840 WP_004932593.1 HlyC/CorC family transporter -
  KCV09_RS09950 lnt 2154312..2155874 (+) 1563 WP_212515096.1 apolipoprotein N-acyltransferase -
  KCV09_RS09955 - 2155915..2156301 (-) 387 WP_228267176.1 hypothetical protein -
  KCV09_RS09960 gspG 2156522..2157043 (-) 522 WP_407651946.1 type II secretion system major pseudopilin GspG -
  KCV09_RS09965 gspF 2157068..2158273 (-) 1206 WP_212515098.1 type II secretion system inner membrane protein GspF -
  KCV09_RS09970 priA 2158412..2160643 (+) 2232 WP_212515767.1 primosomal protein N' Machinery gene
  KCV09_RS09975 - 2160716..2162557 (+) 1842 WP_151815193.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  KCV09_RS09980 - 2162608..2163483 (+) 876 WP_004943908.1 Hsp33 family molecular chaperone HslO -
  KCV09_RS09985 - 2163684..2164625 (+) 942 WP_212515099.1 DnaJ C-terminal domain-containing protein -
  KCV09_RS09990 - 2164637..2164990 (+) 354 WP_088458949.1 chaperone modulator CbpM -
  KCV09_RS09995 crcB 2164987..2165367 (-) 381 WP_076033426.1 fluoride efflux transporter CrcB -

Sequence

Protein


Download         Length: 743 a.a.        Molecular weight: 84212.41 Da        Isoelectric Point: 8.5790

>NTDB_id=558396 KCV09_RS09970 WP_212515767.1 2158412..2160643(+) (priA) [Acinetobacter soli strain M3-1-68]
MHTTPPQPPQDIFRVRVAVPVHLYDTFDYSVSAADYEQAAIGARVLVSFGRQTLVGMITEKLAPDLPLDPRFQLKPIQAL
LDQSPILDQKVLKLLTWSAQYYQFPLGEVIQTALPGLLRQGKDEDILTHIWRIAAHPDPDAKLKRSLKQFEAYQILKLHP
AGTTETILNLSGVDTATLRALQKKELVTCTQEIQDFRPTPVQLAQMPLTANPDQQHAIERVMAHLHAYRAFLLDGLTGSG
KTEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTITRFKSRFHCDVALLHSGLNDSTRLQAWQQAKMGKASIILGTRSAIFT
PLPRLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYHLVEQNKLELLELNQRAGVALMPKV
HLIDLKVAKKQHGLSQKLIEQIQHTLKRQEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTVHTQPYTYLHCHHCGT
IQRMPEACLACNHPTLKTLGMGTAKVEVHLTELFPEHDVIRVDRDSTSRVGSWQKIYDRIQQNKPMILLGTQMLAKGHHF
PFVTLVAILDIDAGLLSVDVRAPERTAQLIVQVSGRAGRGEHKGEVYLQTLRPDHPMLTTLIEKDYRAVAAEILNERRVA
LLPPYRYSVLIRCESKDREYSQAFLQQAAARFLQQAGSVAEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRSWWA
DTVQQPRQHQLRLSIDVDPQEFS

Nucleotide


Download         Length: 2232 bp        

>NTDB_id=558396 KCV09_RS09970 WP_212515767.1 2158412..2160643(+) (priA) [Acinetobacter soli strain M3-1-68]
ATGCACACTACGCCACCTCAGCCCCCTCAAGACATTTTCCGTGTTCGTGTGGCCGTTCCTGTGCATTTATACGATACCTT
CGACTATAGCGTAAGCGCAGCAGATTATGAACAGGCAGCGATCGGTGCACGCGTTTTAGTCTCGTTTGGCCGTCAGACAC
TGGTCGGTATGATTACTGAAAAACTGGCGCCTGATCTGCCACTCGATCCAAGATTTCAATTAAAACCGATTCAGGCTTTA
CTGGATCAATCACCGATCTTAGACCAGAAAGTTTTAAAATTATTGACATGGTCGGCGCAGTATTACCAATTTCCTCTAGG
CGAAGTGATTCAAACGGCATTACCCGGTTTGCTACGTCAAGGCAAGGACGAGGATATTCTGACGCACATCTGGCGCATCG
CGGCGCATCCCGACCCAGACGCAAAACTCAAGCGCTCGCTCAAACAGTTTGAAGCCTATCAAATTCTCAAGCTGCATCCA
GCCGGCACCACTGAGACCATTTTAAATTTAAGCGGCGTCGATACCGCGACCCTTCGGGCTTTACAAAAAAAAGAACTGGT
GACTTGCACACAGGAAATCCAAGATTTCCGTCCCACGCCGGTACAATTGGCACAAATGCCATTAACTGCCAACCCTGACC
AGCAACATGCCATTGAACGCGTTATGGCACATTTGCATGCCTACCGCGCCTTTTTACTCGATGGGCTAACCGGCAGCGGC
AAAACCGAAGTGTATTTGCACATCATGCACGAGGTGCTCAAGCAAGGTAAACAGGTGCTGGTGCTGGTGCCTGAAATTGG
TCTGACACCACAAACCATTACCCGATTCAAATCCCGATTTCACTGTGATGTCGCGTTGCTGCATTCAGGTTTAAACGATT
CCACGCGCTTACAGGCTTGGCAACAGGCCAAAATGGGCAAAGCCTCAATTATTTTGGGCACGCGGTCTGCAATTTTCACC
CCTTTACCGCGTTTGGGATTGATCATTTTAGATGAAGAGCATGATCTTTCTTTTAAGCAGCAAGAAGGCTTTCGCTATCA
TGCACGCGATGTGGCACTGTATCGTGCGCATCTGGAAAATTGTCCGATTATTCTTGGCTCTGCCACGCCCAGTATCGACA
GTTATCATCTGGTCGAACAAAACAAACTTGAATTACTTGAGTTAAATCAACGTGCCGGCGTGGCATTAATGCCTAAAGTA
CACTTGATCGACTTAAAAGTAGCCAAAAAGCAGCACGGATTGAGCCAAAAGCTGATCGAACAAATCCAGCACACCCTCAA
GCGCCAAGAACAAGTCCTGATTTTTTTAAACCGACGTGGCTATGCCCCCGTACTGGTCTGCGAAAGTTGCGGCTGGCAAG
CCAATTGTCCACATTGCGACGCACATTTTACCGTACATACCCAACCCTATACCTACCTGCACTGTCACCACTGTGGCACT
ATTCAGCGCATGCCAGAAGCATGTTTGGCCTGCAATCACCCGACCTTAAAAACCTTGGGCATGGGCACTGCAAAAGTCGA
AGTGCATTTGACCGAACTCTTTCCTGAGCATGATGTGATTCGGGTTGATCGTGACAGTACCAGCCGAGTCGGCAGCTGGC
AAAAAATTTATGACCGAATCCAGCAAAACAAGCCGATGATCTTACTCGGAACCCAAATGCTGGCCAAAGGTCATCACTTT
CCGTTTGTGACCTTGGTGGCGATTTTAGATATCGATGCCGGCTTACTGAGTGTCGATGTCCGTGCGCCAGAACGCACCGC
TCAATTGATTGTTCAAGTTTCGGGACGGGCTGGTCGCGGTGAACATAAAGGCGAAGTGTATCTACAAACCCTGCGCCCCG
ATCATCCGATGCTAACAACGCTGATTGAAAAAGATTATCGTGCCGTTGCCGCCGAAATACTCAATGAACGTCGGGTGGCG
TTGTTGCCCCCTTATCGCTATAGCGTGTTGATCCGCTGTGAATCCAAAGATCGTGAATACAGTCAGGCTTTTTTACAACA
AGCCGCAGCGCGTTTCTTACAACAGGCAGGCAGTGTGGCCGAGATCTGGGGGCCTATTCCCGCGCCAATGGAACGAAAAG
CAGGACGTTATCGGGCACATATGGTGATTTTGGCGCAAGATCGGGCGCGCTTACATTTCTTTTTACGTTCTTGGTGGGCC
GATACCGTACAGCAACCGCGCCAGCATCAGTTACGGCTTTCGATTGATGTCGATCCGCAAGAATTTAGCTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(16-115)

Primosomal protein N C-terminal domain (PriA_C)

(644-739)

Type III restriction enzyme, res subunit (ResIII)

(211-371)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

77.868

99.731

0.777