Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   KCV09_RS00085 Genome accession   NZ_CP073241
Coordinates   19103..23392 (+) Length   1429 a.a.
NCBI ID   WP_212515347.1    Uniprot ID   -
Organism   Acinetobacter soli strain M3-1-68     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 14103..28392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV09_RS00055 - 14179..15285 (-) 1107 WP_212515344.1 efflux RND transporter periplasmic adaptor subunit -
  KCV09_RS00060 - 15344..15901 (-) 558 WP_407651961.1 hypothetical protein -
  KCV09_RS00065 pilG 16226..16609 (+) 384 WP_025094513.1 twitching motility response regulator PilG Regulator
  KCV09_RS00070 - 16636..17007 (+) 372 WP_004935180.1 response regulator -
  KCV09_RS00075 - 17009..17539 (+) 531 WP_004935181.1 chemotaxis protein CheW -
  KCV09_RS00080 - 17581..19035 (+) 1455 WP_212515346.1 hypothetical protein -
  KCV09_RS00085 chpA 19103..23392 (+) 4290 WP_212515347.1 Hpt domain-containing protein Regulator
  KCV09_RS00090 dapE 23435..24568 (-) 1134 WP_004935190.1 succinyl-diaminopimelate desuccinylase -
  KCV09_RS00095 - 24687..24830 (-) 144 WP_088459345.1 entericidin A/B family lipoprotein -
  KCV09_RS00100 - 24962..25831 (-) 870 WP_212515348.1 DUF1853 family protein -
  KCV09_RS00105 - 25973..26386 (+) 414 WP_025094518.1 YbaN family protein -
  KCV09_RS00110 elsL 26373..26882 (+) 510 WP_171496945.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  KCV09_RS00145 - 27842..28306 (+) 465 WP_004935204.1 DUF2750 domain-containing protein -

Sequence


Protein


Download         Length: 1429 a.a.        Molecular weight: 162439.51 Da        Isoelectric Point: 4.6303

>NTDB_id=558382 KCV09_RS00085 WP_212515347.1 19103..23392(+) (chpA) [Acinetobacter soli strain M3-1-68]
MDTALNTRLAALTLPEDQYLDQDQEILDVFIEELEEVFSALERLIQAWHTTPDDQALLQEICRHFNNLKGTGRMVGANAS
SEIAWMVEETLTRILNSILPTTLPIQQYVAQVYRLYQDELIEDFKQRQPHRVDLRPYAFIGSQLQLNLEIEPALMTLLMR
ASQTADELNLAPTNSVKLNESIVIFLEEISVYVADVHHFLANSAPSDDDFNRLLRALHTIRGSSSMACIDAIFDASTALE
STIKQRLLQHGALLSTEQALLGQYLEFITQSVHNIQHGLEAKTLQPLLNIFLDQYQLYQHQLESTAAHELQLNGGVVAAL
LALEIDDLLDAEFEFQDRIRHQSVDYIVILQEQAASLYAATDTDRTRVLHIFTQHLQSVYQELIGITSSDFPQSLYDAFQ
PVHTAFVGLFDSLAAAQHISSFTPYQVLFDQLNREIKPFKPLDLEEFASQSVTTQHSDISTDSVLNLDMQLMSYLAEDRQ
LVLAQPLQVDDSLLEIFLEESEELLAGVETELTLWTEAPHNLDILQHLIRFLHTLKGGANMVQLNQIGLIAHELESIYQR
LIYQQLDVSFELIKIIRIVHDDLAERIQNLYQHAVEFPVSHVLDVLQHIEDWLPAAFAEADCTQNQVIEQAGLKLDDQMS
LSEVLAFNSVPAASETFPQTLVEKMFVDEAQDLLSQAELNLQQWIKERHQRHLLLELQRIFHRLTRSARLLELKYVMDIT
TRLEITFERMNLHNSKTSSYDPLLLNAVQWLRLAIFDTRYDHYHELKHQLEQLELTQPLFPVQFEQIAASLSESGAVSPG
DGTEPPSMHGEWDTSIAVDESNEMIRVSADLIDKMIDQSGENAINRSRIQMDIAQVDTVLGEMELAIQRLSRQLKHLDRV
LDTQSLQQLSGEHTATLEPEQYSNFYHLSKSLAESASDLLDFRTSLTEKIRDTESLLLQQSRIQADLQENLIRTRLVPFS
HLLPRLQRTVRQTALALNRPTQLLVHNTEGELDRSILERLVVPLEHMLRNAIDHGIEDQQTRLSQGKPSIGTIELSIRRH
GTDVVLQLKDDGRGMDSNAIANKAQQLGYLDHFHTLDDDQIFQYIFYPGFSTASAITHISGRGVGLDIVHNEIKALGGKI
TVTAQAGMGTTFSLRVPTTVAVSDALMVKVLDQQYALPLGKIERIVRLSPLILEQYFNSQQDRFELDNTRYKLRYLGEFV
SNVVEPDWSTITGELEVLLIHSSTGPQVALLVDQVVGSRGQIVVKPIGQQFSQVKVVAGASILGDGQVCLILDPITIAEQ
VDQQPRQYRHDTDHERAIREERAMIMVVDDSVTVRKVTSRLLERQGYDVVTAKDGQDALEKLEHIRPDVILLDVEMPRMD
GFEFTRRLRQHNLLQALPIIMISSRTGEKYREMAQQLEVNDYLGKPFQEEQLLAKIQMLLMQATRQTVL

Nucleotide


Download         Length: 4290 bp        

>NTDB_id=558382 KCV09_RS00085 WP_212515347.1 19103..23392(+) (chpA) [Acinetobacter soli strain M3-1-68]
ATGGACACTGCATTAAATACGCGTCTGGCGGCGCTGACCTTGCCTGAAGATCAATATCTGGATCAGGATCAGGAGATTCT
TGACGTTTTTATTGAAGAGCTCGAAGAGGTGTTTAGTGCATTGGAGCGCCTGATTCAGGCTTGGCATACGACGCCTGACG
ATCAAGCCTTGTTGCAAGAAATCTGTCGGCATTTTAATAATTTAAAAGGTACGGGCCGGATGGTGGGGGCCAATGCATCG
AGTGAAATTGCATGGATGGTGGAGGAAACCCTGACACGAATTCTCAACTCAATTTTACCTACTACACTCCCGATTCAGCA
GTATGTGGCTCAGGTTTATCGGCTTTATCAAGATGAACTGATTGAGGATTTTAAACAACGCCAGCCACATCGTGTCGATT
TACGGCCCTATGCATTTATTGGGTCACAGTTACAACTCAATCTCGAGATAGAACCTGCGCTGATGACTCTGCTCATGAGA
GCATCTCAGACAGCTGATGAATTGAATCTCGCGCCAACTAACAGCGTCAAACTAAATGAATCTATTGTCATTTTTCTAGA
AGAAATCTCGGTTTATGTTGCAGATGTCCATCATTTTTTAGCAAACTCAGCCCCTTCGGATGATGACTTTAACCGACTGT
TACGTGCCTTGCATACCATACGTGGTAGCTCATCCATGGCCTGTATCGATGCGATCTTTGATGCCAGTACAGCACTTGAA
AGCACAATCAAGCAGAGATTACTCCAGCATGGAGCACTACTCTCTACCGAGCAGGCTTTGCTTGGGCAGTATCTGGAATT
TATTACACAGTCGGTGCACAACATTCAGCATGGCTTAGAGGCCAAGACGCTTCAACCACTACTGAATATCTTTTTAGATC
AGTATCAGCTTTATCAGCATCAGCTCGAATCGACTGCTGCACATGAGTTACAGCTTAATGGCGGTGTGGTAGCGGCCTTA
CTCGCACTTGAAATTGATGATTTGCTCGATGCCGAATTTGAGTTTCAAGATCGTATACGGCACCAGTCGGTCGATTATAT
TGTGATTTTACAGGAACAGGCCGCAAGCCTATACGCTGCGACCGATACAGACCGAACACGTGTTTTGCATATTTTTACCC
AACATTTGCAATCGGTTTATCAAGAACTCATCGGAATCACGAGTAGTGATTTTCCTCAAAGCCTATATGATGCATTCCAG
CCAGTGCATACCGCATTTGTGGGGCTGTTTGATAGTTTGGCTGCGGCACAGCACATTAGTTCTTTTACACCGTATCAGGT
ACTGTTTGATCAGCTCAATCGAGAAATCAAGCCATTTAAACCGCTTGATTTGGAAGAATTTGCTTCTCAAAGTGTAACGA
CTCAACATAGTGACATCAGTACCGATTCGGTACTTAATCTCGACATGCAACTGATGTCTTATTTGGCAGAAGATCGTCAG
CTTGTGTTGGCACAGCCGTTACAGGTCGATGACAGTTTGCTGGAAATTTTCCTTGAAGAGAGTGAAGAACTATTGGCAGG
CGTCGAAACCGAGCTGACGCTCTGGACCGAAGCACCACATAATTTAGATATCTTGCAACATCTGATCCGGTTTTTGCACA
CCTTAAAAGGGGGTGCCAATATGGTTCAGCTAAATCAGATCGGTTTGATTGCACATGAGCTGGAATCGATTTATCAACGT
CTGATCTATCAGCAATTAGATGTTTCATTCGAACTGATCAAGATCATTCGAATTGTGCATGATGATCTGGCCGAACGGAT
TCAAAACCTGTATCAGCATGCAGTAGAGTTTCCTGTGAGTCATGTCTTGGATGTGCTTCAACATATCGAAGACTGGTTGC
CGGCCGCATTCGCTGAAGCGGATTGTACTCAAAACCAAGTAATCGAGCAGGCTGGGTTAAAGCTTGACGATCAGATGAGC
TTGAGTGAAGTACTGGCGTTCAATTCAGTACCCGCCGCCTCTGAGACTTTTCCGCAAACCTTGGTCGAAAAAATGTTTGT
GGATGAAGCACAAGATTTGCTTTCACAGGCCGAACTCAATCTTCAGCAATGGATCAAGGAGCGTCATCAGCGTCATTTGC
TGTTGGAGCTACAACGTATTTTTCATCGCTTAACGCGCAGTGCACGGCTGCTCGAACTGAAATATGTCATGGACATTACC
ACGCGACTTGAGATTACCTTTGAGCGAATGAACCTGCACAATTCTAAAACGAGCAGCTACGATCCATTACTTCTCAACGC
CGTACAATGGTTGAGACTGGCAATTTTTGATACGCGTTACGATCATTATCACGAACTTAAGCATCAACTTGAGCAGTTAG
AGCTGACTCAACCTTTGTTTCCGGTACAGTTTGAACAGATCGCTGCATCATTGTCCGAATCGGGTGCGGTTAGTCCGGGT
GACGGCACAGAGCCGCCGTCTATGCATGGTGAGTGGGACACTTCCATTGCGGTTGATGAAAGCAATGAAATGATCCGTGT
TTCGGCAGATCTGATTGACAAAATGATTGATCAGTCTGGTGAAAACGCCATCAATCGCTCCCGAATTCAGATGGATATTG
CGCAGGTCGATACCGTTTTGGGTGAAATGGAACTGGCGATTCAGCGTTTATCGCGTCAGCTTAAACATCTGGATCGGGTG
TTAGATACACAATCTTTACAACAGCTTTCTGGTGAACATACCGCTACGCTTGAGCCAGAGCAATATTCAAATTTTTATCA
TTTAAGTAAATCCTTGGCAGAATCGGCATCGGATTTACTCGATTTTCGTACTAGTTTGACCGAAAAAATTCGAGATACCG
AAAGTTTACTGCTCCAGCAATCGCGAATTCAGGCCGATCTGCAAGAAAATCTGATTCGTACTCGCCTGGTTCCGTTTTCG
CATCTTTTACCACGCTTACAACGCACCGTCCGACAAACTGCTCTGGCGCTGAATCGACCAACTCAACTGCTGGTTCACAA
TACAGAAGGCGAGTTAGATCGGAGTATTCTAGAGCGTTTGGTCGTACCGCTCGAACATATGCTCCGCAATGCCATCGATC
ATGGTATTGAAGATCAGCAAACACGACTGAGCCAAGGTAAACCATCAATCGGGACTATTGAGCTTTCTATCCGCCGTCAT
GGTACTGATGTGGTCTTGCAGTTAAAAGACGATGGTCGAGGCATGGACAGCAATGCAATTGCAAACAAGGCGCAGCAACT
GGGCTATTTAGACCATTTTCATACTTTAGATGACGATCAAATCTTCCAGTATATCTTTTACCCGGGGTTTTCAACGGCGT
CTGCAATTACCCATATTTCGGGGCGTGGTGTTGGCCTCGATATTGTGCATAACGAAATCAAGGCACTTGGAGGTAAAATT
ACCGTAACTGCCCAAGCGGGTATGGGAACCACATTTAGCCTGCGTGTGCCCACCACAGTAGCGGTCAGTGATGCGCTGAT
GGTCAAGGTGCTTGATCAGCAATATGCCTTACCACTGGGTAAAATTGAGCGTATTGTGCGCTTATCGCCGCTGATTTTGG
AACAATACTTTAATAGCCAGCAAGATCGTTTTGAGCTTGATAATACCCGCTACAAATTACGTTATCTGGGTGAATTTGTA
AGTAATGTGGTCGAGCCAGACTGGTCAACCATCACAGGTGAGCTGGAGGTGTTGCTGATTCATTCCAGCACAGGGCCGCA
GGTGGCGTTGCTGGTTGATCAGGTGGTCGGATCACGTGGTCAGATTGTGGTGAAACCAATCGGGCAACAGTTTAGTCAGG
TTAAAGTGGTGGCGGGCGCATCGATTTTAGGCGATGGGCAAGTCTGTTTGATCTTAGATCCGATTACCATTGCAGAACAA
GTCGATCAACAGCCACGACAATATCGCCACGATACCGACCACGAGCGCGCTATACGTGAAGAGCGAGCCATGATCATGGT
GGTGGATGATTCAGTGACGGTTCGAAAGGTCACATCACGTTTACTCGAACGCCAAGGGTACGATGTAGTAACAGCCAAAG
ATGGCCAAGATGCGCTAGAGAAGCTGGAGCACATTCGTCCAGATGTCATTTTACTCGACGTTGAGATGCCGCGAATGGAT
GGGTTCGAATTTACTCGCCGTTTACGTCAGCACAATTTACTGCAAGCTTTACCGATTATCATGATCAGCTCACGTACGGG
CGAAAAATACCGCGAGATGGCACAGCAGCTTGAGGTGAACGATTATCTGGGCAAACCTTTTCAAGAGGAACAACTGCTCG
CCAAAATCCAGATGCTGCTCATGCAAGCAACTAGGCAAACTGTTTTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

46.078

100

0.489