Detailed information    

insolico Bioinformatically predicted

Overview

Name   tpc   Type   Machinery gene
Locus tag   KCG51_RS07710 Genome accession   NZ_CP073119
Coordinates   1616427..1617575 (-) Length   382 a.a.
NCBI ID   WP_250580350.1    Uniprot ID   -
Organism   Neisseria subflava strain HP0069     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 1611427..1622575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG51_RS07680 (KCG51_07690) ftsB 1611864..1612139 (+) 276 WP_254342362.1 cell division protein FtsB -
  KCG51_RS07685 (KCG51_07695) - 1612241..1612732 (+) 492 WP_250580342.1 DUF1841 family protein -
  KCG51_RS07690 (KCG51_07700) - 1612843..1613550 (+) 708 WP_250580345.1 SIMPL domain-containing protein -
  KCG51_RS07695 (KCG51_07705) greB 1613639..1614130 (-) 492 WP_003685038.1 transcription elongation factor GreB -
  KCG51_RS07700 (KCG51_07710) purF 1614205..1615748 (-) 1544 Protein_1491 amidophosphoribosyltransferase -
  KCG51_RS07705 (KCG51_07715) - 1615901..1616434 (-) 534 WP_250580348.1 CvpA family protein -
  KCG51_RS07710 (KCG51_07720) tpc 1616427..1617575 (-) 1149 WP_250580350.1 cell division protein FtsN Machinery gene
  KCG51_RS07715 (KCG51_07725) folC 1617589..1618872 (-) 1284 WP_250580352.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  KCG51_RS07720 (KCG51_07730) - 1618911..1619363 (-) 453 WP_250580355.1 protein YgfX -
  KCG51_RS07725 (KCG51_07735) - 1619368..1619727 (-) 360 WP_003747228.1 hypothetical protein -
  KCG51_RS07730 (KCG51_07740) - 1619791..1620519 (-) 729 WP_137040945.1 amino acid ABC transporter ATP-binding protein -
  KCG51_RS07735 (KCG51_07745) - 1620522..1621187 (-) 666 WP_250580356.1 sel1 repeat family protein -
  KCG51_RS07740 (KCG51_07750) rsmA 1621203..1621982 (-) 780 WP_036490462.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -

Sequence

Protein


Download         Length: 382 a.a.        Molecular weight: 41766.78 Da        Isoelectric Point: 10.0252

>NTDB_id=558171 KCG51_RS07710 WP_250580350.1 1616427..1617575(-) (tpc) [Neisseria subflava strain HP0069]
MSDNKQKETPNGYDLDGYERLKRRNRRRLVLASGLVVASGMLFGLALTSGDDKNSPFKEAPVGQSQAKTADEPSKAVVLE
PNKEDVAAAEEAARHADAEAPNKPQNAGDEEDNAPVEVLKPNRESAPEDVGEPLVLINDTLDDGNIKGLEESERIQRAEA
AKREAAERRAEERRQRQAEQRAAAARKTQAQQEAAEKENALAAKKRALQARAEKAEREAAAERNKLAQLEKAEKAIAERK
SAKNSKDSVKDKAEPAKKAEAKVEKPKNEKAKPETAKAEKADKVKTAEKPSEKAKPKAEKEKAEAKPAKKAAIQAGYAEK
ERAQSLQRKMKAAGIDSTITEVMTDKGKVYRVKSASYKNARDAERDLNKLRVHGIAGQVTSE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=558171 KCG51_RS07710 WP_250580350.1 1616427..1617575(-) (tpc) [Neisseria subflava strain HP0069]
ATGTCCGACAATAAACAAAAAGAAACTCCAAACGGATACGATTTAGACGGTTACGAACGACTCAAACGTCGCAACCGCCG
TCGCTTGGTCTTGGCCTCCGGCTTGGTGGTGGCATCGGGTATGCTGTTCGGTCTGGCGCTGACTTCCGGCGACGATAAAA
ATTCACCGTTTAAAGAAGCACCTGTCGGTCAGAGCCAAGCCAAAACGGCTGATGAGCCGAGCAAGGCGGTTGTTTTAGAG
CCTAATAAAGAGGATGTCGCTGCTGCTGAAGAGGCTGCCCGCCATGCGGATGCCGAAGCACCAAATAAACCGCAAAATGC
AGGCGACGAAGAAGACAATGCGCCGGTTGAAGTATTGAAGCCAAACCGTGAATCTGCTCCCGAAGATGTTGGCGAGCCGT
TGGTTTTGATCAACGATACTTTGGATGACGGCAATATTAAAGGCTTGGAAGAGTCCGAACGTATTCAACGCGCCGAGGCT
GCCAAACGTGAAGCCGCGGAGCGCCGAGCAGAAGAGCGCCGCCAACGTCAGGCTGAGCAACGTGCTGCTGCGGCCCGTAA
AACACAAGCCCAACAGGAAGCTGCTGAGAAAGAAAACGCATTGGCAGCTAAAAAACGCGCACTTCAAGCGCGTGCTGAAA
AAGCAGAGCGCGAAGCCGCTGCCGAACGCAATAAATTGGCACAATTGGAAAAAGCAGAGAAAGCCATTGCCGAGCGTAAA
TCTGCCAAAAACAGCAAAGACAGCGTAAAAGACAAGGCAGAACCTGCCAAGAAAGCAGAAGCCAAAGTTGAAAAACCAAA
AAATGAAAAGGCTAAACCAGAAACGGCCAAAGCAGAAAAAGCCGATAAGGTAAAAACTGCCGAGAAGCCGTCTGAAAAAG
CCAAACCTAAAGCTGAAAAAGAAAAAGCAGAAGCCAAGCCTGCGAAAAAAGCCGCCATTCAGGCTGGTTATGCTGAAAAA
GAACGCGCACAAAGCCTGCAACGTAAAATGAAAGCCGCAGGTATCGATTCGACCATTACTGAAGTGATGACCGATAAAGG
TAAGGTGTATCGCGTGAAATCAGCCAGTTATAAAAATGCACGCGATGCAGAGCGCGATTTGAACAAATTGCGTGTACATG
GTATTGCCGGTCAGGTGACCAGTGAGTAA

Domains

Predicted by InterproScan.

SPOR domain (SPOR)

(309-380)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

48.985

100

0.505