Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | KCG56_RS09515 | Genome accession | NZ_CP073116 |
| Coordinates | 1946870..1947916 (+) | Length | 348 a.a. |
| NCBI ID | WP_004519239.1 | Uniprot ID | A0A9X9N302 |
| Organism | Neisseria subflava strain TT0073 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1941870..1952916
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KCG56_RS09495 (KCG56_09545) | dksA | 1943973..1944389 (-) | 417 | WP_254321250.1 | RNA polymerase-binding protein DksA | - |
| KCG56_RS09500 (KCG56_09550) | - | 1944623..1945180 (-) | 558 | WP_254321251.1 | YggT family protein | - |
| KCG56_RS09505 (KCG56_09555) | proC | 1945183..1945980 (-) | 798 | WP_254321252.1 | pyrroline-5-carboxylate reductase | - |
| KCG56_RS09510 (KCG56_09560) | - | 1946057..1946752 (-) | 696 | WP_254321253.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| KCG56_RS09515 (KCG56_09565) | pilT | 1946870..1947916 (+) | 1047 | WP_004519239.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| KCG56_RS09520 (KCG56_09570) | - | 1948003..1949232 (+) | 1230 | WP_254321254.1 | PilT/PilU family type 4a pilus ATPase | - |
| KCG56_RS09525 (KCG56_09575) | yccS | 1949398..1951533 (+) | 2136 | WP_254321255.1 | YccS family putative transporter | - |
| KCG56_RS09530 (KCG56_09580) | - | 1951699..1952877 (-) | 1179 | WP_254321256.1 | phosphoglycerate kinase | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 38446.04 Da Isoelectric Point: 7.1311
>NTDB_id=558089 KCG56_RS09515 WP_004519239.1 1946870..1947916(+) (pilT) [Neisseria subflava strain TT0073]
MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSSEEVGTMITSVMNDHQRKLYQQDFEVDFSFELPNVAR
FRVNAFMTERGPAAVFRTIPSTVLTLEELRAPRIFQKIAENPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIED
PIEFVHQSKKALINQRELHQHTHSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI
VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIAQINAALQTGQAHGMQTLDQA
LQTLVRQGTISPELARSKAQNIENLSVF
MQITDLLAFGVKNKASDLHLSSGISPMIRVHGDIRRINLPEMSSEEVGTMITSVMNDHQRKLYQQDFEVDFSFELPNVAR
FRVNAFMTERGPAAVFRTIPSTVLTLEELRAPRIFQKIAENPRGLVLVTGPTGSGKSTTLAAMVNYINETQPAHILTIED
PIEFVHQSKKALINQRELHQHTHSFTNALRSALREDPDVILIGEMRDPETISLALTAAETGHLVFGTLHTTGAAKTIDRI
VDVFPAGEKEIVRSMLSESLRAIISQTLLKTRDGNGRVAAHEILISTPAVRNLIRENKIAQINAALQTGQAHGMQTLDQA
LQTLVRQGTISPELARSKAQNIENLSVF
Nucleotide
Download Length: 1047 bp
>NTDB_id=558089 KCG56_RS09515 WP_004519239.1 1946870..1947916(+) (pilT) [Neisseria subflava strain TT0073]
ATGCAGATTACCGACTTACTCGCGTTCGGCGTGAAAAACAAAGCCTCCGACCTCCATTTGAGTTCGGGCATTTCCCCTAT
GATACGCGTACACGGCGACATCCGCCGCATCAACCTGCCCGAGATGAGCTCGGAAGAAGTCGGTACCATGATTACCTCGG
TCATGAACGACCACCAGCGCAAGCTCTATCAACAGGATTTTGAAGTCGATTTCTCATTTGAGCTGCCTAATGTTGCCCGT
TTCCGCGTCAACGCCTTTATGACCGAACGCGGCCCGGCCGCCGTATTCCGTACCATTCCGAGCACCGTCCTGACGCTGGA
AGAATTGCGTGCGCCGCGCATTTTCCAAAAAATTGCCGAAAATCCGCGCGGTTTGGTCTTGGTAACCGGCCCGACCGGTT
CGGGTAAATCCACCACGCTGGCGGCGATGGTCAACTACATCAACGAAACCCAACCGGCCCACATTCTGACCATCGAAGAC
CCGATTGAGTTCGTCCACCAAAGCAAAAAGGCGCTCATCAACCAGCGCGAGCTGCATCAGCACACCCACAGCTTCACCAA
CGCACTGCGTTCCGCACTGCGCGAAGACCCAGACGTGATTTTGATCGGTGAGATGCGCGACCCTGAAACCATCTCCCTCG
CCCTAACCGCCGCCGAAACCGGCCACTTGGTTTTCGGCACGCTGCACACAACCGGCGCCGCCAAAACCATCGACCGTATT
GTTGACGTATTCCCTGCAGGCGAAAAAGAAATCGTGCGCTCTATGTTGTCCGAATCCTTGCGTGCCATCATTTCCCAAAC
CCTGCTGAAAACCCGCGACGGCAATGGCCGCGTCGCCGCACACGAAATCCTGATTTCCACACCGGCCGTGCGCAACCTCA
TCCGCGAGAACAAAATCGCCCAAATCAACGCCGCCCTCCAAACCGGTCAGGCCCACGGTATGCAAACCCTCGATCAAGCC
CTGCAAACCCTTGTCCGCCAAGGCACCATCAGCCCTGAGCTGGCACGCAGCAAGGCGCAAAACATCGAAAACCTCTCTGT
TTTCTAA
ATGCAGATTACCGACTTACTCGCGTTCGGCGTGAAAAACAAAGCCTCCGACCTCCATTTGAGTTCGGGCATTTCCCCTAT
GATACGCGTACACGGCGACATCCGCCGCATCAACCTGCCCGAGATGAGCTCGGAAGAAGTCGGTACCATGATTACCTCGG
TCATGAACGACCACCAGCGCAAGCTCTATCAACAGGATTTTGAAGTCGATTTCTCATTTGAGCTGCCTAATGTTGCCCGT
TTCCGCGTCAACGCCTTTATGACCGAACGCGGCCCGGCCGCCGTATTCCGTACCATTCCGAGCACCGTCCTGACGCTGGA
AGAATTGCGTGCGCCGCGCATTTTCCAAAAAATTGCCGAAAATCCGCGCGGTTTGGTCTTGGTAACCGGCCCGACCGGTT
CGGGTAAATCCACCACGCTGGCGGCGATGGTCAACTACATCAACGAAACCCAACCGGCCCACATTCTGACCATCGAAGAC
CCGATTGAGTTCGTCCACCAAAGCAAAAAGGCGCTCATCAACCAGCGCGAGCTGCATCAGCACACCCACAGCTTCACCAA
CGCACTGCGTTCCGCACTGCGCGAAGACCCAGACGTGATTTTGATCGGTGAGATGCGCGACCCTGAAACCATCTCCCTCG
CCCTAACCGCCGCCGAAACCGGCCACTTGGTTTTCGGCACGCTGCACACAACCGGCGCCGCCAAAACCATCGACCGTATT
GTTGACGTATTCCCTGCAGGCGAAAAAGAAATCGTGCGCTCTATGTTGTCCGAATCCTTGCGTGCCATCATTTCCCAAAC
CCTGCTGAAAACCCGCGACGGCAATGGCCGCGTCGCCGCACACGAAATCCTGATTTCCACACCGGCCGTGCGCAACCTCA
TCCGCGAGAACAAAATCGCCCAAATCAACGCCGCCCTCCAAACCGGTCAGGCCCACGGTATGCAAACCCTCGATCAAGCC
CTGCAAACCCTTGTCCGCCAAGGCACCATCAGCCCTGAGCTGGCACGCAGCAAGGCGCAAAACATCGAAAACCTCTCTGT
TTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Neisseria meningitidis 8013 |
86.705 |
99.425 |
0.862 |
| pilT | Neisseria gonorrhoeae MS11 |
86.705 |
99.425 |
0.862 |
| pilT | Acinetobacter nosocomialis M2 |
68.696 |
99.138 |
0.681 |
| pilT | Acinetobacter baumannii D1279779 |
68.696 |
99.138 |
0.681 |
| pilT | Acinetobacter baumannii strain A118 |
68.696 |
99.138 |
0.681 |
| pilT | Pseudomonas stutzeri DSM 10701 |
68.116 |
99.138 |
0.675 |
| pilT | Pseudomonas aeruginosa PAK |
67.826 |
99.138 |
0.672 |
| pilT | Acinetobacter baylyi ADP1 |
67.536 |
99.138 |
0.67 |
| pilT | Legionella pneumophila strain Lp02 |
65.396 |
97.989 |
0.641 |
| pilT | Legionella pneumophila strain ERS1305867 |
65.396 |
97.989 |
0.641 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65 |
97.701 |
0.635 |
| pilT | Vibrio cholerae strain A1552 |
65 |
97.701 |
0.635 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.662 |
95.115 |
0.491 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.092 |
100 |
0.411 |
| pilU | Vibrio cholerae strain A1552 |
39.655 |
100 |
0.397 |
| pilU | Acinetobacter baylyi ADP1 |
39.08 |
100 |
0.391 |