Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   INT76_RS10450 Genome accession   NZ_CP073084
Coordinates   2083748..2084749 (+) Length   333 a.a.
NCBI ID   WP_212573073.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2078748..2089749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS10430 (INT76_10430) - 2078845..2080239 (-) 1395 WP_212570570.1 amino acid permease -
  INT76_RS10435 (INT76_10435) - 2080337..2081170 (-) 834 WP_212570572.1 DUF975 family protein -
  INT76_RS10440 (INT76_10440) tgt 2081303..2082445 (+) 1143 WP_212570582.1 tRNA guanosine(34) transglycosylase Tgt -
  INT76_RS10445 (INT76_10445) - 2082491..2083576 (-) 1086 WP_212570584.1 Xaa-Pro peptidase family protein -
  INT76_RS10450 (INT76_10450) ccpA 2083748..2084749 (+) 1002 WP_212573073.1 catabolite control protein A Regulator
  INT76_RS10455 (INT76_10455) - 2084794..2086110 (-) 1317 WP_212570586.1 GntP family permease -
  INT76_RS10460 (INT76_10460) folK 2086212..2086739 (-) 528 WP_212570588.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  INT76_RS10465 (INT76_10465) folB 2086736..2087098 (-) 363 WP_212570590.1 dihydroneopterin aldolase -
  INT76_RS10470 (INT76_10470) folP 2087091..2087897 (-) 807 WP_212570592.1 dihydropteroate synthase -
  INT76_RS10475 (INT76_10475) folE 2087913..2088476 (-) 564 WP_212573074.1 GTP cyclohydrolase I FolE -
  INT76_RS10480 (INT76_10480) - 2088654..2089121 (+) 468 WP_212570594.1 8-oxo-dGTP diphosphatase -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36603.56 Da        Isoelectric Point: 5.4833

>NTDB_id=557869 INT76_RS10450 WP_212573073.1 2083748..2084749(+) (ccpA) [Streptococcus oriscaviae strain HKU75]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYYA
TLAKGIDDIADMYKYNIVLANSDESDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYAKATSDAVQVLAKHNEKIAFVSGPLVDDINGKVRFSGYKAGLKANGLEFNEGLVFESKYKYEEGYALAERILNSG
ATAAYVAEDEIAAGLLNGISDKGIKVPEEFEIITSDDSIVTKFTSPNLTSISQPLYDIGAIAMRMLTKIMHKEDLESREV
ILNHGIKDRHSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=557869 INT76_RS10450 WP_212573073.1 2083748..2084749(+) (ccpA) [Streptococcus oriscaviae strain HKU75]
ATGAATACCGACGATACGGTAACGATTTATGACGTTGCTCGCGAAGCAGGTGTTTCCATGGCTACGGTTAGCCGTGTAGT
AAACGGTAATAAGAATGTCAAGGAAAACACTCGTAAGAAAGTTTTAGAAGTCATCGATCGCTTGGATTATCGTCCCAATG
CTGTTGCAAGAGGACTTGCTAGTAAAAAAACGACAACAGTAGGGGTTGTCATTCCAAATATAGCTAATGCTTACTACGCA
ACCTTGGCTAAGGGAATTGATGATATTGCAGATATGTATAAGTATAATATCGTCCTAGCCAACAGCGATGAAAGTGATGA
AAAAGAAATCAATGTTGTCAATACCCTCTTTTCAAAACAGGTGGATGGCATTATCTTTATGGGCTACCATTTGACTGACA
AGATTCGTGCTGAGTTTTCACGCTCCCGTACACCGATTGTTTTGGCGGGGACAGTAGATTTGGAGCATCAGTTGCCAAGC
GTCAACATTGATTATGCGAAGGCAACGTCTGATGCGGTGCAGGTTCTTGCTAAGCACAATGAAAAGATTGCTTTTGTATC
GGGGCCGCTAGTGGACGATATTAACGGGAAGGTTCGTTTTTCTGGTTATAAGGCTGGTCTTAAAGCCAATGGCCTGGAGT
TCAACGAAGGTCTTGTCTTTGAATCCAAGTACAAGTATGAAGAAGGCTATGCCTTGGCAGAACGCATTTTGAACTCTGGA
GCGACAGCTGCCTATGTAGCAGAAGATGAGATAGCAGCAGGACTCTTGAACGGGATTTCAGACAAGGGAATCAAGGTTCC
AGAAGAGTTTGAAATCATCACCAGCGATGACTCGATTGTGACCAAATTTACCAGTCCAAACCTGACCTCCATCAGCCAAC
CGCTCTATGACATTGGTGCCATTGCTATGCGGATGCTGACCAAGATTATGCACAAGGAAGACTTGGAAAGCCGCGAGGTT
ATCTTGAACCACGGTATCAAAGATCGTCACTCAACCAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.88

100

0.799

  ccpA Streptococcus gordonii str. Challis substr. CH1

79.279

100

0.793

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

99.399

0.574