Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   INT76_RS08680 Genome accession   NZ_CP073084
Coordinates   1713903..1714616 (+) Length   237 a.a.
NCBI ID   WP_212573054.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708903..1719616
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS08665 (INT76_08665) - 1709660..1709938 (+) 279 WP_212570049.1 hypothetical protein -
  INT76_RS08670 (INT76_08670) treC 1710012..1711637 (-) 1626 WP_212570050.1 alpha,alpha-phosphotrehalase -
  INT76_RS08675 (INT76_08675) treP 1711699..1713711 (-) 2013 WP_212570051.1 PTS system trehalose-specific EIIBC component -
  INT76_RS08680 (INT76_08680) treR 1713903..1714616 (+) 714 WP_212573054.1 trehalose operon repressor Regulator
  INT76_RS08685 (INT76_08685) - 1714679..1714984 (+) 306 WP_212570052.1 hypothetical protein -
  INT76_RS08690 (INT76_08690) - 1714988..1715536 (+) 549 WP_212570053.1 CvpA family protein -
  INT76_RS08695 (INT76_08695) - 1715610..1717943 (+) 2334 WP_212570054.1 endonuclease MutS2 -
  INT76_RS08700 (INT76_08700) - 1717968..1718618 (+) 651 WP_212570055.1 GNAT family N-acetyltransferase -
  INT76_RS08705 (INT76_08705) trxA 1718799..1719113 (+) 315 WP_212570056.1 thioredoxin -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27179.06 Da        Isoelectric Point: 6.1400

>NTDB_id=557865 INT76_RS08680 WP_212573054.1 1713903..1714616(+) (treR) [Streptococcus oriscaviae strain HKU75]
MKKYQEIFNDIKEKIINQTYPAESSLPTEKELQTLYGVSRDTIRKALSLLTERGLIQKVQGRGSLVLKQEVLNFPVSGLT
SYQELAQSLHINSQTEVVSLELLTVNSNLAQLTGFEVFSKVWKVVRTRSIDGKVSVLDTDYLAQELIPVLTEEIASQSIY
AYLEGELGLDIAYAQKEITVEPTSPEEQKLMHTQDEFLVLIRSRVYLGDTRQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=557865 INT76_RS08680 WP_212573054.1 1713903..1714616(+) (treR) [Streptococcus oriscaviae strain HKU75]
ATGAAAAAATACCAAGAAATTTTTAATGACATAAAAGAAAAAATTATCAATCAGACCTATCCTGCAGAAAGTTCCTTGCC
AACTGAAAAAGAGCTGCAAACTCTTTACGGTGTCAGCCGGGACACGATTCGAAAGGCTCTCTCCCTCCTGACCGAACGTG
GCTTGATTCAAAAGGTGCAAGGGAGAGGCTCGCTGGTTCTCAAGCAAGAAGTCCTCAACTTTCCGGTATCGGGCTTGACC
TCTTATCAAGAATTAGCTCAAAGCCTTCATATCAATAGCCAGACAGAAGTGGTTAGCCTAGAATTGCTAACAGTTAATAG
CAATCTGGCCCAACTGACAGGCTTTGAAGTGTTTAGCAAGGTCTGGAAGGTTGTCCGTACAAGGTCGATTGATGGAAAGG
TTTCTGTCCTCGACACCGACTATCTGGCACAGGAATTGATTCCTGTACTGACAGAGGAAATTGCTAGTCAGTCCATCTAT
GCCTACCTAGAAGGGGAGCTGGGATTGGACATTGCCTATGCACAGAAAGAGATTACGGTGGAGCCAACCAGTCCGGAAGA
GCAAAAGCTGATGCATACCCAAGATGAGTTTCTGGTCTTAATTCGTTCCCGCGTCTATCTGGGGGATACCCGTCAATTTC
AGTACACAGAAAGCAAGCACAAGATTGACAAATTCCGCTTTGTTGACTTTGCCCGCCGCAAACACTCTCTTTAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(90-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.991

98.734

0.523