Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | INT76_RS08215 | Genome accession | NZ_CP073084 |
| Coordinates | 1609708..1612161 (+) | Length | 817 a.a. |
| NCBI ID | WP_212569963.1 | Uniprot ID | - |
| Organism | Streptococcus oriscaviae strain HKU75 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1604708..1617161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INT76_RS08195 (INT76_08195) | tsf | 1605195..1606235 (+) | 1041 | WP_212569959.1 | translation elongation factor Ts | - |
| INT76_RS08200 (INT76_08200) | - | 1606403..1608682 (+) | 2280 | WP_212569960.1 | PL29 family lyase N-terminal domain-containing protein | - |
| INT76_RS08205 (INT76_08205) | traF | 1608756..1609094 (-) | 339 | WP_212569961.1 | conjugal transfer protein TraF | - |
| INT76_RS08210 (INT76_08210) | - | 1609248..1609706 (+) | 459 | WP_212569962.1 | CtsR family transcriptional regulator | - |
| INT76_RS08215 (INT76_08215) | clpC | 1609708..1612161 (+) | 2454 | WP_212569963.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| INT76_RS08220 (INT76_08220) | - | 1612363..1613424 (+) | 1062 | WP_212569964.1 | AAA family ATPase | - |
| INT76_RS08225 (INT76_08225) | pnuC | 1613457..1614275 (+) | 819 | WP_212569965.1 | nicotinamide riboside transporter PnuC | - |
| INT76_RS08230 (INT76_08230) | - | 1614277..1615059 (+) | 783 | WP_212569966.1 | NUDIX domain-containing protein | - |
| INT76_RS08235 (INT76_08235) | dusB | 1615101..1616111 (-) | 1011 | WP_212569967.1 | tRNA dihydrouridine synthase DusB | - |
| INT76_RS08240 (INT76_08240) | hslO | 1616104..1616970 (-) | 867 | WP_212569968.1 | Hsp33 family molecular chaperone HslO | - |
Sequence
Protein
Download Length: 817 a.a. Molecular weight: 90426.77 Da Isoelectric Point: 6.0956
>NTDB_id=557861 INT76_RS08215 WP_212569963.1 1609708..1612161(+) (clpC) [Streptococcus oriscaviae strain HKU75]
MKFSSGLQRTFEDAQLIAQRYSCDFLETWHILLAFVINPDTIAGSTLVEYPADVEDYEHAAYVVTEKVYREELEAVTILP
ASKRLEETLQFARQIGEVVKAKQLGTEHLFMAMLLNKRTIASQILDKVGFHFEDSDDKVRFLDLRKNLEAKAGFSKEHLK
AIRALMKGGKSKQPSMANMMGMPPTAQSGGLEDYTRDLTALARAGQIEPVIGRDEEISRMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQKVADGEVPSSLSKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGSLRTVGATTQDEYQKHIEKDAALARRFAKVSIEEPSVADSIAILRGLKSAYEKHHRVIISDQAL
VTAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRIKSEGAEGELTALDRALMSKKYKTVSQLLIKETEDIQRPVSQLAVT
EDDVLVTLSRLSGIPVSKLSKTDAKKYLSLESELHKRVIGQDQAISAVSRAIRRNQSGIRTGHRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDEAALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYAVLLFDEVEKAHPDTFNILLQ
VLDDGQLTDSKGRKVDFSNTLIIMTSNLGATALRDDKTVGFGALDLSRSQEHVEKRIFEELKKAYRPEFINRIDEKVVFH
SLSEQDMQEVVKVMVAPLLGVMAEKGIQLKLQPSALKQLATEGYDPEMGARPLRRLLQTKLEDPLAEMLLKRELEAGSIL
KVGVKSGRLTFTVTSQD
MKFSSGLQRTFEDAQLIAQRYSCDFLETWHILLAFVINPDTIAGSTLVEYPADVEDYEHAAYVVTEKVYREELEAVTILP
ASKRLEETLQFARQIGEVVKAKQLGTEHLFMAMLLNKRTIASQILDKVGFHFEDSDDKVRFLDLRKNLEAKAGFSKEHLK
AIRALMKGGKSKQPSMANMMGMPPTAQSGGLEDYTRDLTALARAGQIEPVIGRDEEISRMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQKVADGEVPSSLSKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGSLRTVGATTQDEYQKHIEKDAALARRFAKVSIEEPSVADSIAILRGLKSAYEKHHRVIISDQAL
VTAVTYAKRYLTSKNLPDSAIDLLDEASATVQNRIKSEGAEGELTALDRALMSKKYKTVSQLLIKETEDIQRPVSQLAVT
EDDVLVTLSRLSGIPVSKLSKTDAKKYLSLESELHKRVIGQDQAISAVSRAIRRNQSGIRTGHRPIGSFMFLGPTGVGKT
ELAKALAEVLFDDEAALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYAVLLFDEVEKAHPDTFNILLQ
VLDDGQLTDSKGRKVDFSNTLIIMTSNLGATALRDDKTVGFGALDLSRSQEHVEKRIFEELKKAYRPEFINRIDEKVVFH
SLSEQDMQEVVKVMVAPLLGVMAEKGIQLKLQPSALKQLATEGYDPEMGARPLRRLLQTKLEDPLAEMLLKRELEAGSIL
KVGVKSGRLTFTVTSQD
Nucleotide
Download Length: 2454 bp
>NTDB_id=557861 INT76_RS08215 WP_212569963.1 1609708..1612161(+) (clpC) [Streptococcus oriscaviae strain HKU75]
ATGAAATTTTCAAGTGGTTTGCAGCGGACGTTTGAGGACGCGCAACTGATTGCCCAGCGATATAGCTGTGATTTTTTAGA
AACCTGGCACATCCTGCTGGCTTTTGTTATCAATCCAGATACTATTGCAGGGTCCACTCTGGTGGAGTACCCTGCCGATG
TTGAAGACTATGAACATGCAGCCTATGTCGTGACAGAAAAAGTCTACCGTGAAGAGCTAGAAGCGGTCACCATTTTGCCA
GCGTCTAAGCGCTTGGAGGAAACGCTTCAATTTGCAAGGCAGATTGGTGAGGTTGTGAAGGCGAAGCAGTTGGGAACAGA
GCACCTCTTTATGGCTATGCTTCTAAACAAGCGGACCATTGCTTCGCAGATTTTGGACAAGGTGGGCTTTCATTTTGAAG
ACTCCGATGACAAGGTGCGTTTTCTTGATTTGCGAAAGAATTTGGAAGCCAAGGCGGGTTTTAGCAAGGAACACCTCAAG
GCCATCCGCGCCCTCATGAAGGGAGGCAAGTCCAAGCAGCCAAGTATGGCCAATATGATGGGGATGCCACCGACAGCTCA
GAGCGGTGGGTTGGAAGATTATACCCGCGATTTGACAGCTCTGGCGCGAGCGGGGCAGATTGAACCTGTGATTGGTCGAG
ATGAAGAAATTTCTCGCATGATTCAAATTCTTTCCCGTAAGACCAAGAACAACCCTGTTTTGGTTGGGGATGCCGGTGTC
GGAAAGACTGCTCTAGCATTGGGATTGGCTCAAAAGGTAGCAGATGGGGAAGTTCCATCTAGCCTATCCAAAATGCGTGT
TTTGGAGCTGGACTTGATGAATGTCATTGCAGGTACTCGTTTCCGTGGGGATTTTGAAGAGCGGATGAACAATATTATCA
ACGATATTGAAGAAGACGGGCAAGTCATCCTCTTCATCGATGAGCTCCACACCATCATGGGCTCTGGTTCAGGAATTGAT
TCTACGTTGGATGCAGCCAATATCCTCAAGCCTGCTCTAGCGCGTGGCAGTCTACGAACAGTCGGGGCAACCACTCAAGA
CGAATACCAAAAGCACATTGAAAAAGACGCGGCCTTAGCCCGCCGCTTTGCTAAGGTGAGCATTGAAGAACCAAGTGTGG
CAGACAGTATCGCTATTTTGCGTGGCCTCAAATCGGCCTACGAGAAGCACCACAGGGTAATCATTTCAGATCAGGCGCTA
GTCACTGCTGTAACCTATGCCAAGCGCTATCTGACCAGCAAGAACCTACCCGATTCGGCTATTGATTTGCTGGATGAAGC
CAGCGCTACTGTCCAAAATCGTATCAAGTCAGAAGGTGCAGAAGGAGAACTAACAGCTCTTGACAGGGCTCTGATGTCTA
AAAAATATAAGACGGTCAGCCAGCTCTTGATTAAAGAAACCGAGGACATTCAAAGACCCGTTAGCCAGTTGGCTGTGACA
GAAGATGATGTTTTGGTGACTCTCAGTCGCCTATCTGGGATTCCTGTATCCAAACTCAGTAAGACAGATGCGAAGAAATA
TCTATCCTTGGAAAGCGAACTCCATAAGCGGGTTATTGGACAAGACCAAGCCATTTCAGCGGTCAGCCGTGCCATCCGTC
GCAATCAATCAGGTATTCGAACTGGCCACCGTCCTATCGGTTCCTTCATGTTTTTGGGGCCGACAGGTGTCGGAAAGACC
GAGCTAGCTAAGGCACTGGCGGAGGTGCTGTTTGATGATGAAGCTGCCTTGATTCGCTTTGATATGAGTGAGTATATGGA
AAAGTTTGCGGCCAGCCGCTTGAATGGAGCCCCTCCTGGTTATGTGGGCTATGAAGAAGGGGGCGAGTTGACAGAAAAAG
TTCGCAACAAGCCTTATGCGGTTCTCCTCTTTGATGAGGTGGAAAAGGCCCATCCGGATACCTTTAATATTCTCTTGCAA
GTCTTAGACGATGGTCAATTGACGGACAGCAAGGGGCGTAAGGTAGATTTCTCCAATACCCTGATTATCATGACTTCTAA
CTTGGGGGCGACGGCTTTAAGAGATGACAAGACAGTTGGGTTCGGGGCTCTTGACCTTTCTCGCAGTCAGGAACATGTTG
AAAAGCGGATTTTTGAGGAATTGAAGAAGGCCTATCGTCCAGAATTTATCAACCGGATTGATGAAAAGGTTGTCTTTCAC
AGTCTGTCCGAGCAGGATATGCAGGAGGTGGTCAAGGTTATGGTGGCACCGCTTCTTGGAGTCATGGCCGAAAAAGGCAT
CCAGCTCAAATTACAGCCTTCAGCACTCAAACAGTTGGCAACAGAAGGCTATGATCCAGAAATGGGTGCAAGACCGCTTC
GCCGGCTTCTTCAGACCAAGCTGGAGGATCCGTTGGCAGAGATGTTGCTGAAAAGGGAGTTGGAAGCAGGCTCTATCCTG
AAAGTAGGGGTTAAGTCTGGTAGGCTGACCTTTACAGTGACGAGTCAGGACTAG
ATGAAATTTTCAAGTGGTTTGCAGCGGACGTTTGAGGACGCGCAACTGATTGCCCAGCGATATAGCTGTGATTTTTTAGA
AACCTGGCACATCCTGCTGGCTTTTGTTATCAATCCAGATACTATTGCAGGGTCCACTCTGGTGGAGTACCCTGCCGATG
TTGAAGACTATGAACATGCAGCCTATGTCGTGACAGAAAAAGTCTACCGTGAAGAGCTAGAAGCGGTCACCATTTTGCCA
GCGTCTAAGCGCTTGGAGGAAACGCTTCAATTTGCAAGGCAGATTGGTGAGGTTGTGAAGGCGAAGCAGTTGGGAACAGA
GCACCTCTTTATGGCTATGCTTCTAAACAAGCGGACCATTGCTTCGCAGATTTTGGACAAGGTGGGCTTTCATTTTGAAG
ACTCCGATGACAAGGTGCGTTTTCTTGATTTGCGAAAGAATTTGGAAGCCAAGGCGGGTTTTAGCAAGGAACACCTCAAG
GCCATCCGCGCCCTCATGAAGGGAGGCAAGTCCAAGCAGCCAAGTATGGCCAATATGATGGGGATGCCACCGACAGCTCA
GAGCGGTGGGTTGGAAGATTATACCCGCGATTTGACAGCTCTGGCGCGAGCGGGGCAGATTGAACCTGTGATTGGTCGAG
ATGAAGAAATTTCTCGCATGATTCAAATTCTTTCCCGTAAGACCAAGAACAACCCTGTTTTGGTTGGGGATGCCGGTGTC
GGAAAGACTGCTCTAGCATTGGGATTGGCTCAAAAGGTAGCAGATGGGGAAGTTCCATCTAGCCTATCCAAAATGCGTGT
TTTGGAGCTGGACTTGATGAATGTCATTGCAGGTACTCGTTTCCGTGGGGATTTTGAAGAGCGGATGAACAATATTATCA
ACGATATTGAAGAAGACGGGCAAGTCATCCTCTTCATCGATGAGCTCCACACCATCATGGGCTCTGGTTCAGGAATTGAT
TCTACGTTGGATGCAGCCAATATCCTCAAGCCTGCTCTAGCGCGTGGCAGTCTACGAACAGTCGGGGCAACCACTCAAGA
CGAATACCAAAAGCACATTGAAAAAGACGCGGCCTTAGCCCGCCGCTTTGCTAAGGTGAGCATTGAAGAACCAAGTGTGG
CAGACAGTATCGCTATTTTGCGTGGCCTCAAATCGGCCTACGAGAAGCACCACAGGGTAATCATTTCAGATCAGGCGCTA
GTCACTGCTGTAACCTATGCCAAGCGCTATCTGACCAGCAAGAACCTACCCGATTCGGCTATTGATTTGCTGGATGAAGC
CAGCGCTACTGTCCAAAATCGTATCAAGTCAGAAGGTGCAGAAGGAGAACTAACAGCTCTTGACAGGGCTCTGATGTCTA
AAAAATATAAGACGGTCAGCCAGCTCTTGATTAAAGAAACCGAGGACATTCAAAGACCCGTTAGCCAGTTGGCTGTGACA
GAAGATGATGTTTTGGTGACTCTCAGTCGCCTATCTGGGATTCCTGTATCCAAACTCAGTAAGACAGATGCGAAGAAATA
TCTATCCTTGGAAAGCGAACTCCATAAGCGGGTTATTGGACAAGACCAAGCCATTTCAGCGGTCAGCCGTGCCATCCGTC
GCAATCAATCAGGTATTCGAACTGGCCACCGTCCTATCGGTTCCTTCATGTTTTTGGGGCCGACAGGTGTCGGAAAGACC
GAGCTAGCTAAGGCACTGGCGGAGGTGCTGTTTGATGATGAAGCTGCCTTGATTCGCTTTGATATGAGTGAGTATATGGA
AAAGTTTGCGGCCAGCCGCTTGAATGGAGCCCCTCCTGGTTATGTGGGCTATGAAGAAGGGGGCGAGTTGACAGAAAAAG
TTCGCAACAAGCCTTATGCGGTTCTCCTCTTTGATGAGGTGGAAAAGGCCCATCCGGATACCTTTAATATTCTCTTGCAA
GTCTTAGACGATGGTCAATTGACGGACAGCAAGGGGCGTAAGGTAGATTTCTCCAATACCCTGATTATCATGACTTCTAA
CTTGGGGGCGACGGCTTTAAGAGATGACAAGACAGTTGGGTTCGGGGCTCTTGACCTTTCTCGCAGTCAGGAACATGTTG
AAAAGCGGATTTTTGAGGAATTGAAGAAGGCCTATCGTCCAGAATTTATCAACCGGATTGATGAAAAGGTTGTCTTTCAC
AGTCTGTCCGAGCAGGATATGCAGGAGGTGGTCAAGGTTATGGTGGCACCGCTTCTTGGAGTCATGGCCGAAAAAGGCAT
CCAGCTCAAATTACAGCCTTCAGCACTCAAACAGTTGGCAACAGAAGGCTATGATCCAGAAATGGGTGCAAGACCGCTTC
GCCGGCTTCTTCAGACCAAGCTGGAGGATCCGTTGGCAGAGATGTTGCTGAAAAGGGAGTTGGAAGCAGGCTCTATCCTG
AAAGTAGGGGTTAAGTCTGGTAGGCTGACCTTTACAGTGACGAGTCAGGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
71.13 |
99.633 |
0.709 |
| clpC | Streptococcus pneumoniae D39 |
71.13 |
99.633 |
0.709 |
| clpC | Streptococcus pneumoniae TIGR4 |
70.885 |
99.633 |
0.706 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.483 |
100 |
0.655 |
| clpC | Streptococcus thermophilus LMD-9 |
65.483 |
100 |
0.655 |
| clpC | Streptococcus mutans UA159 |
65.602 |
99.633 |
0.654 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.425 |
100 |
0.485 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.147 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
46.636 |
80.049 |
0.373 |