Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   INT76_RS05385 Genome accession   NZ_CP073084
Coordinates   1060237..1062030 (-) Length   597 a.a.
NCBI ID   WP_212572947.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1055237..1067030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS05365 (INT76_05365) - 1056158..1057060 (-) 903 WP_212572943.1 ABC transporter permease -
  INT76_RS05370 (INT76_05370) opp4B 1057074..1058030 (-) 957 WP_212572944.1 oligopeptide ABC transporter permease -
  INT76_RS05375 (INT76_05375) - 1058032..1058973 (-) 942 WP_212572945.1 ATP-binding cassette domain-containing protein -
  INT76_RS05380 (INT76_05380) - 1058976..1059974 (-) 999 WP_212572946.1 ABC transporter ATP-binding protein -
  INT76_RS05385 (INT76_05385) oppA 1060237..1062030 (-) 1794 WP_212572947.1 oligopeptide ABC transporter substrate-binding protein Regulator
  INT76_RS05390 (INT76_05390) pbp3 1062238..1063482 (+) 1245 WP_212572948.1 D-alanyl-D-alanine carboxypeptidase PBP3 -
  INT76_RS05395 (INT76_05395) - 1063501..1064109 (+) 609 WP_212572949.1 hypothetical protein -
  INT76_RS05400 (INT76_05400) sufB 1064394..1065809 (-) 1416 WP_212572950.1 Fe-S cluster assembly protein SufB -
  INT76_RS05405 (INT76_05405) sufU 1065839..1066282 (-) 444 WP_212572951.1 Fe-S cluster assembly sulfur transfer protein SufU -

Sequence

Protein


Download         Length: 597 a.a.        Molecular weight: 65891.50 Da        Isoelectric Point: 4.2854

>NTDB_id=557840 INT76_RS05385 WP_212572947.1 1060237..1062030(-) (oppA) [Streptococcus oriscaviae strain HKU75]
MKKKRNWLALAGVTLLSASVLVACGSKSSTSSKAPETTFPAEVTHDGDAISGGQLNYAIVAASTSTGLLIDELTDNNVDS
TFGGMVDSSMFGYDGNRKLDDSGLAKVDFDIEGKKLTVTLTGKDYKWSDGEAFTIDDYIFTIKAMADKGYTGVRFDDRFT
NIVGMDEFVAGTATDISGLEKVDDYTVVLNVKEMTPSMMYAGGNVPAFVMPEHIYKDIPVADWEASEYSRTAKHVGMGPF
KVKDIVSGESVTFVANENYFKGKPKLDSVKMDIVSPDTIVSEMKAGNYDIADMPTDQLDSYKDLSNITVTGSLASVYEYI
SFNLGTYDETAKKNVMNESAKMNNVNLRQAIAYAIDTKQAGEALYNGLYRPANSLIISFFGDVHDSELPGYTYDPEKAKE
LLDEAGYKDVDGDGLREDPNGEKLTINFAARKRTEANETLIQQYLTWWKEVGLDVQLYTGRTIEINSFYDMLQANDANID
MYAGGWSTGYDPDPTGLWGPSAMFNFSRFVSDENTALLKAIASVESFDEKTNVENFKKWQQYAYEQAFAIPTFENEELTA
VNKRVKYFDNYYGSASKGSVQAWEKVELTADKGVVSE

Nucleotide


Download         Length: 1794 bp        

>NTDB_id=557840 INT76_RS05385 WP_212572947.1 1060237..1062030(-) (oppA) [Streptococcus oriscaviae strain HKU75]
ATGAAAAAGAAACGTAACTGGCTTGCTCTTGCAGGTGTAACGCTTTTGTCTGCATCTGTACTTGTGGCTTGTGGTTCTAA
ATCTTCAACAAGTTCAAAAGCTCCGGAAACAACTTTCCCTGCTGAAGTGACTCACGATGGGGACGCGATTTCAGGCGGTC
AATTGAACTATGCTATTGTTGCTGCATCAACTTCTACCGGTCTTTTGATTGACGAGTTGACAGACAATAACGTTGACTCT
ACTTTTGGTGGGATGGTCGATAGTTCTATGTTTGGCTATGACGGCAACCGTAAGTTGGACGACTCAGGTCTTGCTAAGGT
GGACTTTGACATCGAAGGCAAGAAGCTGACCGTTACTTTGACTGGTAAAGACTACAAGTGGTCAGACGGCGAAGCCTTCA
CTATTGATGACTACATCTTCACCATCAAGGCGATGGCAGATAAGGGTTATACTGGTGTACGTTTCGACGACCGCTTTACC
AACATCGTCGGTATGGATGAGTTCGTTGCAGGAACAGCAACTGACATCTCAGGTCTTGAGAAGGTGGATGACTACACAGT
TGTCTTGAACGTGAAAGAAATGACTCCTTCTATGATGTATGCTGGTGGTAATGTCCCTGCATTCGTTATGCCAGAGCACA
TCTACAAAGACATTCCAGTAGCAGACTGGGAAGCAAGCGAGTACTCTCGTACAGCTAAGCATGTAGGTATGGGACCATTC
AAGGTAAAAGACATCGTTAGCGGTGAGTCTGTTACCTTTGTAGCCAACGAGAACTACTTCAAAGGCAAACCAAAATTGGA
CAGCGTGAAGATGGACATTGTTTCACCAGACACCATCGTATCTGAGATGAAAGCTGGTAACTACGACATCGCTGACATGC
CAACAGACCAGTTGGACTCTTACAAAGACCTGTCAAACATCACAGTTACAGGAAGTCTGGCTTCAGTTTATGAGTACATC
TCATTCAACCTTGGAACCTACGATGAAACTGCTAAGAAGAATGTGATGAATGAAAGTGCGAAGATGAACAACGTTAATCT
TCGTCAAGCGATTGCCTACGCTATCGATACAAAACAAGCAGGCGAAGCGCTTTACAATGGTCTGTATCGTCCGGCAAACT
CATTGATTATCTCCTTCTTCGGCGATGTACACGATTCTGAGTTGCCAGGATACACCTACGACCCAGAAAAAGCAAAAGAG
CTCTTGGATGAAGCAGGCTACAAGGATGTAGATGGTGATGGCCTTCGCGAAGATCCAAATGGTGAAAAACTCACTATCAA
CTTTGCTGCTCGTAAGCGTACAGAAGCAAACGAAACCCTTATCCAACAATACTTGACATGGTGGAAAGAAGTTGGTTTGG
ATGTTCAGCTTTACACAGGTCGTACGATTGAAATCAACTCATTCTACGATATGTTGCAAGCCAACGATGCCAACATCGAC
ATGTACGCTGGTGGCTGGTCAACAGGTTATGATCCAGACCCAACAGGTCTTTGGGGACCAAGCGCAATGTTCAACTTCTC
ACGTTTCGTATCAGATGAGAACACTGCCTTGCTCAAAGCTATTGCTTCTGTAGAATCATTTGATGAAAAGACAAATGTTG
AAAACTTCAAGAAATGGCAACAATATGCTTACGAACAAGCCTTTGCTATTCCAACATTTGAAAACGAAGAGTTGACTGCG
GTAAACAAACGCGTGAAATACTTTGACAACTACTATGGTTCAGCATCTAAAGGTTCAGTTCAGGCTTGGGAAAAGGTTGA
ATTGACAGCTGACAAAGGTGTCGTTTCAGAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(112-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

73.913

100

0.74