Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   INT76_RS04250 Genome accession   NZ_CP073084
Coordinates   841502..843283 (-) Length   593 a.a.
NCBI ID   WP_249116182.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 836502..848283
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS04225 (INT76_04225) - 836899..837321 (+) 423 WP_212572518.1 hypothetical protein -
  INT76_RS04230 (INT76_04230) - 837311..839131 (+) 1821 WP_212572520.1 acyltransferase family protein -
  INT76_RS04235 (INT76_04235) - 839168..839818 (-) 651 WP_212572522.1 phosphatase PAP2 family protein -
  INT76_RS04240 (INT76_04240) - 839842..840399 (-) 558 WP_212572530.1 ECF transporter S component -
  INT76_RS04245 (INT76_04245) - 840695..841237 (-) 543 WP_212572532.1 tRNA (cytidine(34)-2'-O)-methyltransferase -
  INT76_RS04250 (INT76_04250) oppA 841502..843283 (-) 1782 WP_249116182.1 oligopeptide ABC transporter substrate-binding protein Regulator
  INT76_RS04255 (INT76_04255) yidD 843455..843700 (-) 246 WP_212572534.1 membrane protein insertion efficiency factor YidD -
  INT76_RS04260 (INT76_04260) - 843697..844431 (-) 735 WP_212572536.1 pseudouridine synthase -
  INT76_RS04265 (INT76_04265) scpB 844421..844990 (-) 570 WP_212572538.1 SMC-Scp complex subunit ScpB -
  INT76_RS04270 (INT76_04270) - 844974..845693 (-) 720 WP_212572539.1 segregation/condensation protein A -
  INT76_RS04275 (INT76_04275) xerD 845693..846424 (-) 732 WP_212572541.1 site-specific tyrosine recombinase XerD -
  INT76_RS04280 (INT76_04280) cbpB 846434..846880 (-) 447 WP_212572543.1 cyclic-di-AMP-binding protein CbpB -
  INT76_RS04285 (INT76_04285) - 846877..847404 (-) 528 WP_212572551.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 593 a.a.        Molecular weight: 65929.65 Da        Isoelectric Point: 4.1346

>NTDB_id=557833 INT76_RS04250 WP_249116182.1 841502..843283(-) (oppA) [Streptococcus oriscaviae strain HKU75]
MNTMKKQFALAGISFLSLAVLVACQTKQGGTEEASQSFASEVTHDGTPIDGGQLNYAVVASAPTTGILIDELVVNVADAN
FSDMVDISMFGYDENRELDDSGLAKAEFDVDKRTVTVSLTGKDYKWSDGQPFTIDDYIFTIEQMASPDYAGVRFDSTYTN
IEGMDEFIAGTASNISGIEKVDDYTVVLTMKEMTPSMLYAGGAVPAMVMPKHIYKDIAVKDWENSEYSRTAKTVGMGPYK
IKEIVSGESITYVPNEYYYKGQVKLDSLKMDVVSPDTIVAEMKAGHYDIADMPIDQLDAYKDLSNITLLGSLQGTYNYVS
FNLGHYDAETGKNVMNQDAKMNNVKLRQAIGYALDNAMAGEKLYNGLYHPTNSLIISFFGKLNDKEMEGYTYNPEKAKQL
LDEAGYKDIDGDGLREDPDGNSFTISLAAQKSTETQETLVQQYISWWKEIGLNVELFTGRTIEFNTFYDQVEANDAGIDM
YMAAWSTGLDPNPTALWGPEAMFNYSRFVSDENTELLDAISSVESFDEKVNFENYKAWQQYAFEQAFAIPTFERESITAV
NKRVKYYDTYIGSATKRSAELIELTAEEGIAAK

Nucleotide


Download         Length: 1782 bp        

>NTDB_id=557833 INT76_RS04250 WP_249116182.1 841502..843283(-) (oppA) [Streptococcus oriscaviae strain HKU75]
ATGAATACAATGAAAAAGCAGTTCGCGCTAGCGGGAATTAGTTTTTTGTCACTTGCAGTTTTGGTAGCCTGTCAGACAAA
GCAAGGTGGAACAGAAGAAGCAAGTCAGTCCTTTGCTTCGGAAGTGACTCATGATGGTACACCGATTGATGGTGGTCAAC
TAAATTATGCGGTGGTTGCTTCTGCGCCAACAACCGGTATTTTGATTGATGAGCTGGTTGTCAATGTAGCAGATGCTAAT
TTTTCAGACATGGTTGATATTTCCATGTTTGGCTACGACGAAAACCGTGAGCTGGATGATTCTGGTCTAGCTAAGGCTGA
GTTCGATGTAGACAAGCGAACCGTCACCGTTAGTTTGACGGGTAAGGATTACAAGTGGTCAGATGGCCAGCCTTTTACCA
TTGATGACTACATTTTCACCATTGAGCAGATGGCTAGTCCAGACTACGCAGGTGTCCGATTTGACTCCACCTATACTAAT
ATTGAAGGCATGGATGAGTTCATTGCAGGGACAGCAAGCAACATCTCGGGTATTGAAAAGGTAGACGACTATACGGTTGT
CTTGACCATGAAAGAAATGACACCTTCTATGCTTTATGCAGGAGGGGCTGTGCCAGCAATGGTGATGCCAAAACACATTT
ATAAGGATATTGCCGTCAAAGATTGGGAAAACAGTGAGTATTCTCGTACAGCAAAGACGGTCGGCATGGGACCTTATAAG
ATTAAAGAAATTGTCAGCGGTGAGTCCATTACCTATGTACCAAACGAGTATTACTACAAGGGGCAAGTCAAGTTGGACAG
CCTGAAAATGGATGTTGTATCACCTGACACCATTGTGGCGGAAATGAAGGCTGGTCACTATGACATTGCAGATATGCCGA
TTGATCAGCTAGATGCCTATAAAGATTTGTCCAACATTACCTTGCTGGGCAGTCTGCAAGGAACCTATAATTATGTTTCC
TTCAACTTGGGGCATTACGACGCCGAAACTGGCAAAAATGTTATGAACCAAGATGCCAAGATGAACAATGTCAAGTTACG
GCAGGCCATCGGTTATGCTCTGGACAATGCTATGGCTGGTGAGAAACTTTACAACGGACTCTACCATCCAACCAACTCAC
TGATTATTTCCTTCTTTGGTAAGTTGAATGATAAGGAGATGGAGGGCTATACCTATAATCCTGAAAAGGCCAAGCAACTC
TTGGATGAAGCGGGATATAAGGATATAGATGGAGATGGTCTTCGTGAAGATCCAGACGGCAACAGCTTTACCATCAGTCT
TGCAGCCCAAAAGAGCACAGAAACCCAAGAGACCCTGGTTCAGCAGTACATTAGCTGGTGGAAGGAAATCGGTCTAAACG
TTGAACTATTTACTGGGCGTACGATTGAATTCAACACCTTCTATGACCAGGTGGAAGCTAATGATGCAGGAATTGATATG
TATATGGCGGCTTGGTCAACTGGTCTGGATCCAAATCCAACAGCACTTTGGGGACCAGAAGCTATGTTCAACTACTCTCG
CTTTGTGTCGGATGAAAATACAGAACTGTTGGATGCTATTTCGTCAGTTGAATCTTTTGATGAAAAGGTCAACTTTGAAA
ACTATAAAGCATGGCAACAGTATGCCTTTGAACAAGCCTTTGCTATTCCAACATTTGAGCGGGAGAGTATTACGGCTGTC
AATAAGCGTGTTAAATACTACGATACCTACATCGGTTCTGCAACAAAGAGATCAGCTGAATTGATTGAATTGACGGCAGA
AGAAGGTATTGCAGCTAAGTAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(102-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

67.114

100

0.675