Detailed information NTG0557745

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L1P12_RS23950
• Genome accession: NZ_CP091026
• Coordinates: 4822165..4823190 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain STEC383
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4817165..4828190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1P12_RS23925	metJ	4817602..4817919 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
L1P12_RS23930	yiiX	4818103..4818711 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
L1P12_RS23935	-	4818718..4819341 (+)	624	WP_000720774.1	TIGR02117 family protein	-
L1P12_RS23940	rpmE	4819396..4819608 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
L1P12_RS23945	priA	4819811..4822009 (+)	2199	WP_096111137.1	primosomal protein N'	Machinery gene
L1P12_RS23950	cytR	4822165..4823190 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L1P12_RS23955	ftsN	4823282..4824241 (+)	960	WP_071598226.1	cell division protein FtsN	-
L1P12_RS23960	hslV	4824334..4824864 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
L1P12_RS23965	hslU	4824874..4826205 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
L1P12_RS23970	menA	4826272..4827198 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L1P12_RS23975	rraA	4827291..4827776 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L1P12_RS23980	zapB	4827861..4828106 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=557745 L1P12_RS23950 WP_000644904.1 4822165..4823190(+) (cytR) [Escherichia coli strain STEC383]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=557745 L1P12_RS23950 WP_000644904.1 4822165..4823190(+) (cytR) [Escherichia coli strain STEC383]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCAGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628