Detailed information NTG0557667

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: KBU60_RS14155
• Genome accession: NZ_CP073068
• Coordinates: 3030468..3031475 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FB-11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3025468..3036475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KBU60_RS14135 (KBU60_14135)	rplC	3026002..3026631 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
KBU60_RS14140 (KBU60_14140)	rpsJ	3026646..3026957 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
KBU60_RS14145 (KBU60_14145)	rpmE	3027415..3027636 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
KBU60_RS14150 (KBU60_14150)	priA	3027931..3030135 (+)	2205	WP_025622698.1	primosomal protein N'	-
KBU60_RS14155 (KBU60_14155)	cytR	3030468..3031475 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
KBU60_RS14160 (KBU60_14160)	ftsN	3031652..3032197 (+)	546	WP_005489623.1	cell division protein FtsN	-
KBU60_RS14165 (KBU60_14165)	hslV	3032362..3032913 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
KBU60_RS14170 (KBU60_14170)	hslU	3032937..3034268 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
KBU60_RS14175 (KBU60_14175)	-	3034453..3035370 (+)	918	WP_140113737.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
KBU60_RS14180 (KBU60_14180)	rraA	3035447..3035959 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
KBU60_RS14185 (KBU60_14185)	zapB	3036064..3036306 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=557667 KBU60_RS14155 WP_005481416.1 3030468..3031475(+) (cytR) [Vibrio parahaemolyticus strain FB-11]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=557667 KBU60_RS14155 WP_005481416.1 3030468..3031475(+) (cytR) [Vibrio parahaemolyticus strain FB-11]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
GGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCAGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCCAAACGACTCGGTCTGCGCGTTCCGCAAGATTT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904