Detailed information NTG0557597

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: L1P13_RS00905
• Genome accession: NZ_CP091024
• Coordinates: 190345..191328 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain STEC379
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 185345..196328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1P13_RS00890	dppA	186488..188095 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
L1P13_RS00895	dppB	188403..189422 (+)	1020	WP_097732890.1	dipeptide ABC transporter permease DppB	-
L1P13_RS00900	dppC	189432..190334 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
L1P13_RS00905	amiE	190345..191328 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
L1P13_RS00910	dppF	191325..192329 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
L1P13_RS00915	yhjV	192359..193630 (-)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
L1P13_RS00920	-	194106..194213 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L1P13_RS00925	-	194589..194696 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L1P13_RS00930	-	195072..195179 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
L1P13_RS00935	-	195555..195662 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=557597 L1P13_RS00905 WP_001196496.1 190345..191328(+) (amiE) [Escherichia coli strain STEC379]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=557597 L1P13_RS00905 WP_001196496.1 190345..191328(+) (amiE) [Escherichia coli strain STEC379]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGTGTTTAACGGTCAGGATTTGCAGCGTATATCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACTACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAATATGGCGCTGGTGTTAATTACCCATGATC
TGGCGCTGGTGGCGGAAGCGGCGCATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACCCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401