Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KAJ74_RS13450 Genome accession   NZ_CP073012
Coordinates   2741759..2742445 (+) Length   228 a.a.
NCBI ID   WP_072361794.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA14+     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2736759..2747445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAJ74_RS13410 (KAJ74_13410) yqeH 2737023..2738123 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  KAJ74_RS13415 (KAJ74_13415) - 2738153..2738386 (+) 234 Protein_2616 ribosome biogenesis GTPase YqeH -
  KAJ74_RS13420 (KAJ74_13420) aroE 2738400..2739206 (+) 807 WP_000666761.1 shikimate dehydrogenase -
  KAJ74_RS13425 (KAJ74_13425) yhbY 2739210..2739500 (+) 291 WP_000627815.1 ribosome assembly RNA-binding protein YhbY -
  KAJ74_RS13430 (KAJ74_13430) nadD 2739503..2740072 (+) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KAJ74_RS13435 (KAJ74_13435) yqeK 2740062..2740646 (+) 585 WP_001019326.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KAJ74_RS13440 (KAJ74_13440) rsfS 2740647..2741000 (+) 354 WP_001088020.1 ribosome silencing factor -
  KAJ74_RS13445 (KAJ74_13445) - 2741003..2741719 (+) 717 WP_000084822.1 class I SAM-dependent methyltransferase -
  KAJ74_RS13450 (KAJ74_13450) comEA 2741759..2742445 (+) 687 WP_072361794.1 ComEA family DNA-binding protein Machinery gene
  KAJ74_RS13455 (KAJ74_13455) - 2742537..2742998 (+) 462 WP_000439693.1 ComE operon protein 2 -
  KAJ74_RS13460 (KAJ74_13460) comEC 2743003..2745204 (+) 2202 WP_025174327.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KAJ74_RS13465 (KAJ74_13465) holA 2745261..2746235 (+) 975 WP_031587652.1 DNA polymerase III subunit delta -
  KAJ74_RS13470 (KAJ74_13470) rpsT 2746280..2746531 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=557347 KAJ74_RS13450 WP_072361794.1 2741759..2742445(+) (comEA) [Staphylococcus aureus strain SA14+]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=557347 KAJ74_RS13450 WP_072361794.1 2741759..2742445(+) (comEA) [Staphylococcus aureus strain SA14+]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

97.797

99.561

0.974