Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   IAU58_RS08875 Genome accession   NZ_CP072945
Coordinates   1852678..1853304 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter sp. MGH 7     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1847678..1858304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAU58_RS08855 - 1848077..1849837 (-) 1761 WP_032608967.1 Lon protease family protein -
  IAU58_RS08860 matP 1850024..1850476 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  IAU58_RS08865 ompA 1850542..1851594 (-) 1053 WP_017694761.1 porin OmpA -
  IAU58_RS08870 sulA 1851951..1852460 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  IAU58_RS08875 sxy/tfoX 1852678..1853304 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  IAU58_RS08880 yccS 1853261..1855423 (-) 2163 WP_032608968.1 YccS family putative transporter -
  IAU58_RS08885 - 1855442..1855888 (-) 447 WP_003858149.1 YccF domain-containing protein -
  IAU58_RS08890 helD 1856011..1858065 (+) 2055 WP_032608969.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=556974 IAU58_RS08875 WP_023315767.1 1852678..1853304(+) (sxy/tfoX) [Enterobacter sp. MGH 7]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=556974 IAU58_RS08875 WP_023315767.1 1852678..1853304(+) (sxy/tfoX) [Enterobacter sp. MGH 7]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572