Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J9870_RS27500 Genome accession   NZ_CP072913
Coordinates   6300509..6300937 (-) Length   142 a.a.
NCBI ID   WP_210641764.1    Uniprot ID   -
Organism   Pseudomonas sp. Tri1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6295509..6305937
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9870_RS27485 - 6297328..6299388 (-) 2061 WP_210641759.1 methyl-accepting chemotaxis protein -
  J9870_RS27490 - 6299547..6300086 (-) 540 WP_210641761.1 chemotaxis protein CheW -
  J9870_RS27495 pilH 6300097..6300462 (-) 366 WP_210641763.1 twitching motility response regulator PilH -
  J9870_RS27500 pilG 6300509..6300937 (-) 429 WP_210641764.1 response regulator Regulator
  J9870_RS27505 gshB 6301162..6302115 (+) 954 WP_210641766.1 glutathione synthase -
  J9870_RS27510 - 6302193..6303089 (+) 897 WP_210641768.1 energy transducer TonB -
  J9870_RS27515 - 6303289..6303858 (+) 570 WP_018609528.1 YqgE/AlgH family protein -
  J9870_RS27520 ruvX 6303858..6304295 (+) 438 WP_109752386.1 Holliday junction resolvase RuvX -
  J9870_RS27525 pyrR 6304381..6304887 (+) 507 WP_210641770.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  J9870_RS27530 - 6304912..6305916 (+) 1005 WP_003177495.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15521.96 Da        Isoelectric Point: 7.4360

>NTDB_id=556828 J9870_RS27500 WP_210641764.1 6300509..6300937(-) (pilG) [Pseudomonas sp. Tri1]
MAEHPTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKN
NSAFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIQAHVPGFTAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=556828 J9870_RS27500 WP_210641764.1 6300509..6300937(-) (pilG) [Pseudomonas sp. Tri1]
ATGGCAGAGCATCCGACGCAACAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCAC
CGCCGAAACCTTGCTGCGCAACGTGGGGTGCGAGGTGATCACGGCCATTGACGGCTTCGATGCGCTGGCCAAGATCGCCG
ATCATCACCCGGGCATTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCCCTGATCAAGAAC
AACAGCGCGTTCAAGGCCACGCCGGTGATCATGCTGTCGTCCCGGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGT
CGGTTCCGATCAGTTTTTGACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGTGCGATACAAGCCCATGTTCCGGGCTTTA
CCGCTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.119

83.099

0.641