Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   L1A16_RS00825 Genome accession   NZ_CP090885
Coordinates   157135..157575 (-) Length   146 a.a.
NCBI ID   WP_000861956.1    Uniprot ID   A0A0H2UNA2
Organism   Streptococcus pneumoniae strain ND6401     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 152135..162575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A16_RS00800 (L1A16_00800) - 152396..153682 (+) 1287 WP_000278868.1 response regulator transcription factor -
  L1A16_RS00805 (L1A16_00805) - 153734..154267 (+) 534 WP_000729030.1 hypothetical protein -
  L1A16_RS00810 (L1A16_00810) nrdI 154345..154815 (+) 471 WP_000849621.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  L1A16_RS00815 (L1A16_00815) - 155108..156370 (-) 1263 WP_000075789.1 NRAMP family divalent metal transporter -
  L1A16_RS00820 (L1A16_00820) - 156680..157138 (-) 459 WP_000745054.1 DUF3021 domain-containing protein -
  L1A16_RS00825 (L1A16_00825) brsR 157135..157575 (-) 441 WP_000861956.1 LytTR family DNA-binding domain-containing protein Regulator
  L1A16_RS10625 - 157663..157788 (-) 126 WP_001822433.1 hypothetical protein -
  L1A16_RS00830 (L1A16_00830) hexB 157931..159880 (+) 1950 WP_000018169.1 DNA mismatch repair endonuclease MutL Machinery gene
  L1A16_RS00835 (L1A16_00835) ribE 160205..160672 (-) 468 WP_001099502.1 6,7-dimethyl-8-ribityllumazine synthase -
  L1A16_RS00840 (L1A16_00840) - 160673..161878 (-) 1206 WP_000456639.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II -
  L1A16_RS00845 (L1A16_00845) ribE 161898..162533 (-) 636 WP_000493846.1 riboflavin synthase -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17183.84 Da        Isoelectric Point: 5.3783

>NTDB_id=556693 L1A16_RS00825 WP_000861956.1 157135..157575(-) (brsR) [Streptococcus pneumoniae strain ND6401]
MKVELQISETYEEEKLIVQAPQETEKVQKVIEFAENLDQREKIKGKIDDQVYLVEIGKIQRFYIENRKVLAETASQTYSI
DLRLYQVLKLLPTNFIQISQSEIINIDSISHLKLTPNGLVEIFLKNESFTYSSRRYLKTIKEKLEL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=556693 L1A16_RS00825 WP_000861956.1 157135..157575(-) (brsR) [Streptococcus pneumoniae strain ND6401]
ATGAAAGTAGAACTACAGATTAGTGAGACTTACGAGGAGGAAAAGCTGATTGTCCAAGCACCTCAAGAAACCGAAAAAGT
CCAGAAAGTCATCGAGTTCGCAGAAAATCTGGACCAAAGAGAAAAAATCAAAGGAAAAATCGATGATCAGGTCTATCTAG
TTGAGATTGGCAAGATTCAGCGCTTCTATATCGAGAATCGGAAGGTTCTAGCAGAAACCGCGAGTCAGACCTACAGCATT
GATTTGCGACTCTATCAGGTTCTTAAACTCTTGCCAACCAATTTTATCCAAATTTCCCAATCAGAAATCATCAATATCGA
TTCCATCTCTCACCTCAAGCTCACGCCAAACGGTCTGGTAGAAATTTTCTTGAAAAACGAAAGCTTCACCTACTCTTCAC
GCCGTTATCTAAAAACCATCAAGGAGAAATTAGAACTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UNA2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.054

100

0.363