Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   L1A14_RS08765 Genome accession   NZ_CP090883
Coordinates   1705898..1706608 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain LE4448     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1700898..1711608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A14_RS08750 (L1A14_08750) - 1701439..1701687 (-) 249 WP_000364990.1 YneF family protein -
  L1A14_RS08755 (L1A14_08755) treC 1701943..1703568 (-) 1626 WP_000171215.1 alpha,alpha-phosphotrehalase -
  L1A14_RS08760 (L1A14_08760) treP 1703746..1705713 (-) 1968 WP_000514312.1 PTS system trehalose-specific EIIBC component -
  L1A14_RS08765 (L1A14_08765) treR 1705898..1706608 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  L1A14_RS08770 (L1A14_08770) - 1706763..1708098 (+) 1336 Protein_1742 ISL3 family transposase -
  L1A14_RS08775 (L1A14_08775) - 1708173..1709099 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -
  L1A14_RS08780 (L1A14_08780) amiE 1709110..1710177 (-) 1068 WP_000159555.1 ABC transporter ATP-binding protein Regulator
  L1A14_RS08785 (L1A14_08785) amiD 1710186..1711112 (-) 927 WP_000103700.1 oligopeptide ABC transporter permease OppC Regulator

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=556528 L1A14_RS08765 WP_000760673.1 1705898..1706608(+) (treR) [Streptococcus pneumoniae strain LE4448]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=556528 L1A14_RS08765 WP_000760673.1 1705898..1706608(+) (treR) [Streptococcus pneumoniae strain LE4448]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAGAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593