Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J8L76_RS05995 Genome accession   NZ_CP072875
Coordinates   1293752..1294114 (+) Length   120 a.a.
NCBI ID   WP_216132173.1    Uniprot ID   A0A975XW33
Organism   Azospira inquinata strain Azo-2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1288752..1299114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J8L76_RS05970 (J8L76_05970) nifW 1288852..1289184 (-) 333 WP_216131084.1 nitrogenase stabilizing/protective protein NifW -
  J8L76_RS05975 (J8L76_05975) nifV 1289198..1290337 (-) 1140 WP_216131087.1 homocitrate synthase -
  J8L76_RS05980 (J8L76_05980) hemL 1290576..1291856 (-) 1281 WP_216131090.1 glutamate-1-semialdehyde 2,1-aminomutase -
  J8L76_RS05985 (J8L76_05985) thiE 1291843..1292523 (-) 681 WP_216131093.1 thiamine phosphate synthase -
  J8L76_RS05990 (J8L76_05990) thiD 1292516..1293358 (-) 843 WP_216131096.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  J8L76_RS05995 (J8L76_05995) pilG 1293752..1294114 (+) 363 WP_216132173.1 response regulator Regulator
  J8L76_RS06000 (J8L76_06000) - 1294144..1294506 (+) 363 WP_269751311.1 response regulator transcription factor -
  J8L76_RS06005 (J8L76_06005) - 1294525..1295040 (+) 516 WP_216131099.1 chemotaxis protein CheW -
  J8L76_RS06010 (J8L76_06010) - 1295096..1297291 (+) 2196 WP_216131102.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13359.41 Da        Isoelectric Point: 6.4479

>NTDB_id=556487 J8L76_RS05995 WP_216132173.1 1293752..1294114(+) (pilG) [Azospira inquinata strain Azo-2]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALSKIADHQPDIVFCDIMMPRLDGYQTCALIKKNPRFRSTPVVMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLLAVAEHGQPQVQ

Nucleotide


Download         Length: 363 bp        

>NTDB_id=556487 J8L76_RS05995 WP_216132173.1 1293752..1294114(+) (pilG) [Azospira inquinata strain Azo-2]
ATGGTGATTGACGACAGCAATACCATCCGTCGCAGCGCGGAGATTTTCCTCGTTCAGGCAGGGTGCCAGGTGGTGCTGGC
AGAAGACGGATTCGATGCCCTGTCCAAGATTGCCGATCATCAGCCCGATATCGTCTTCTGCGACATCATGATGCCCCGTC
TGGATGGCTATCAGACCTGTGCCCTGATCAAGAAAAATCCCCGTTTTCGCTCCACTCCGGTGGTCATGCTGTCCTCCAAA
GACGGCCTGTTTGACCGTGCCCGGGGGCGGATGGTCGGTTCCGACCAATACCTCACCAAACCCTTTACCAAAGACAGCCT
GCTCCTGGCCGTGGCGGAACACGGTCAGCCCCAGGTGCAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.298

95

0.658