Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   J9319_RS11395 Genome accession   NZ_CP072851
Coordinates   2208845..2209648 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain 6ww6     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2203845..2214648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9319_RS11375 (J9319_11375) - 2203852..2205924 (-) 2073 WP_017367572.1 sigma-54-dependent Fis family transcriptional regulator -
  J9319_RS11380 (J9319_11380) - 2206074..2206310 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  J9319_RS11385 (J9319_11385) - 2206344..2207081 (-) 738 WP_035390781.1 glycerophosphodiester phosphodiesterase -
  J9319_RS11390 (J9319_11390) - 2207308..2208408 (-) 1101 WP_210552096.1 Rap family tetratricopeptide repeat protein -
  J9319_RS11395 (J9319_11395) spo0A 2208845..2209648 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  J9319_RS11400 (J9319_11400) spoIVB 2209932..2211209 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  J9319_RS11405 (J9319_11405) recN 2211407..2213140 (-) 1734 WP_025207605.1 DNA repair protein RecN Machinery gene
  J9319_RS11410 (J9319_11410) argR 2213175..2213624 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=556377 J9319_RS11395 WP_008342226.1 2208845..2209648(-) (spo0A) [Bacillus altitudinis strain 6ww6]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=556377 J9319_RS11395 WP_008342226.1 2208845..2209648(-) (spo0A) [Bacillus altitudinis strain 6ww6]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTAGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGTTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGCCATGCCATTGAAGTGGCTTGGAGTAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884