Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   J9312_RS04675 Genome accession   NZ_CP072845
Coordinates   913375..914169 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain XP     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 908375..919169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9312_RS04645 (J9312_04625) sxzA 909214..910245 (+) 1032 WP_003233568.1 FecCD family ABC transporter permease -
  J9312_RS04650 (J9312_04630) yfhB 910360..911241 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  J9312_RS04655 (J9312_04635) yfhC 911329..911913 (+) 585 WP_032723010.1 nitroreductase -
  J9312_RS04660 (J9312_04640) yfhD 911952..912143 (-) 192 WP_003233561.1 YfhD family protein -
  J9312_RS04665 (J9312_04645) yfhE 912210..912320 (-) 111 WP_003223230.1 YfhE family protein -
  J9312_RS04670 (J9312_04650) yfhF 912375..913286 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  J9312_RS04675 (J9312_04655) recX 913375..914169 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  J9312_RS04680 (J9312_04660) yfhH 914171..914485 (+) 315 WP_003244592.1 YfhH family protein -
  J9312_RS04685 (J9312_04665) yfhI 914628..915821 (+) 1194 WP_003243500.1 MFS transporter -
  J9312_RS04690 (J9312_04670) sspK 915853..916005 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  J9312_RS04695 (J9312_04675) yfhJ 916130..916399 (+) 270 WP_003243789.1 YfhJ family protein -
  J9312_RS04700 (J9312_04680) - 916510..917660 (+) 1151 WP_087614160.1 IS3 family transposase -
  J9312_RS04705 (J9312_04685) yfhK 917834..918352 (+) 519 WP_069964064.1 SH3 domain-containing protein -
  J9312_RS04710 (J9312_04690) spdL 918437..918769 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=556176 J9312_RS04675 WP_014479217.1 913375..914169(+) (recX) [Bacillus subtilis strain XP]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=556176 J9312_RS04675 WP_014479217.1 913375..914169(+) (recX) [Bacillus subtilis strain XP]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992