Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   L0998_RS04930 Genome accession   NZ_CP090876
Coordinates   969992..970615 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain SAUR_BFS12     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 964992..975615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0998_RS04900 (L0998_04900) - 965031..965129 (-) 99 WP_054190753.1 hypothetical protein -
  L0998_RS04905 (L0998_04905) - 965116..965358 (-) 243 WP_000246909.1 YneF family protein -
  L0998_RS04910 (L0998_04910) recP/tkt 965636..967624 (-) 1989 WP_054190754.1 transketolase Machinery gene
  L0998_RS04915 (L0998_04915) - 967745..967984 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  L0998_RS04920 (L0998_04920) - 968118..969434 (-) 1317 WP_054190390.1 ISL3 family transposase -
  L0998_RS04925 (L0998_04925) sosA 969616..969849 (-) 234 WP_077446722.1 DNA damage-induced cell division inhibitor SosA -
  L0998_RS04930 (L0998_04930) dinR/lexA 969992..970615 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  L0998_RS04935 (L0998_04935) - 970995..972011 (-) 1017 WP_171973432.1 CAP domain-containing protein -
  L0998_RS04945 (L0998_04945) guaC 972033..973010 (-) 978 WP_054190611.1 GMP reductase -
  L0998_RS04950 (L0998_04950) rpsN 973167..973436 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  L0998_RS04955 (L0998_04955) rpmG 973889..974038 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=555981 L0998_RS04930 WP_001208755.1 969992..970615(+) (dinR/lexA) [Staphylococcus aureus strain SAUR_BFS12]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=555981 L0998_RS04930 WP_001208755.1 969992..970615(+) (dinR/lexA) [Staphylococcus aureus strain SAUR_BFS12]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGTGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACATTTAACATCGACACACAATAGCGATATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACC
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657