Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   L0998_RS03000 Genome accession   NZ_CP090876
Coordinates   543279..544553 (-) Length   424 a.a.
NCBI ID   WP_054190131.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SAUR_BFS12     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 538279..549553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0998_RS02985 (L0998_02985) - 540565..540657 (+) 93 WP_031761401.1 hypothetical protein -
  L0998_RS02990 (L0998_02990) - 540637..541542 (-) 906 WP_054190133.1 transglycosylase domain-containing protein -
  L0998_RS02995 (L0998_02995) tyrS 541923..543185 (+) 1263 WP_054190132.1 tyrosine--tRNA ligase -
  L0998_RS03000 (L0998_03000) htrA 543279..544553 (-) 1275 WP_054190131.1 S1C family serine protease Regulator
  L0998_RS03005 (L0998_03005) - 544725..545342 (+) 618 WP_054190130.1 lysophospholipid acyltransferase family protein -
  L0998_RS03010 (L0998_03010) nagE 545469..546935 (+) 1467 WP_054190129.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  L0998_RS03015 (L0998_03015) - 547042..548172 (+) 1131 WP_054190128.1 HAD family hydrolase -
  L0998_RS03020 (L0998_03020) - 548133..548228 (-) 96 WP_054190127.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45747.90 Da        Isoelectric Point: 9.8964

>NTDB_id=555955 L0998_RS03000 WP_054190131.1 543279..544553(-) (htrA) [Staphylococcus aureus strain SAUR_BFS12]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYIAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=555955 L0998_RS03000 WP_054190131.1 543279..544553(-) (htrA) [Staphylococcus aureus strain SAUR_BFS12]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAAACAACAAATAATAAAGGCGGCAATCAATTAGACGGGCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTAATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGTGTAGGTTCAGGTGTCATCTATCAAATAAACA
ATAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGATGCTGAGACAACTGGTGGTAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCTGGTAACTCAGGCGGCGCATTAGTAGATATAAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATATCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGCCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.557

94.811

0.366