Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   J8615_RS20105 Genome accession   NZ_CP072791
Coordinates   338374..338538 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain GS-1     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 333374..343538
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J8615_RS20100 srfAB 335265..338357 (+) 3093 Protein_309 surfactin non-ribosomal peptide synthetase SrfAB -
  J8615_RS20105 comS 338374..338538 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=555872 J8615_RS20105 WP_269195014.1 338374..338538(+) (comS) [Bacillus velezensis strain GS-1]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=555872 J8615_RS20105 WP_269195014.1 338374..338538(+) (comS) [Bacillus velezensis strain GS-1]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5