Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   LT978_RS19350 Genome accession   NZ_CP090838
Coordinates   3873298..3874380 (-) Length   360 a.a.
NCBI ID   WP_003156401.1    Uniprot ID   A0AAI8HS26
Organism   Bacillus amyloliquefaciens strain TL106     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3868298..3879380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LT978_RS19325 (LT978_19320) cysE 3868396..3869049 (-) 654 WP_003156410.1 serine O-acetyltransferase -
  LT978_RS19330 (LT978_19325) gltX 3869361..3870812 (-) 1452 WP_015388783.1 glutamate--tRNA ligase -
  LT978_RS19335 (LT978_19330) ispF 3870904..3871380 (-) 477 WP_003156407.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  LT978_RS19340 (LT978_19335) ispD 3871373..3872071 (-) 699 WP_003156405.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  LT978_RS19345 (LT978_19340) - 3872084..3873184 (-) 1101 WP_003156403.1 PIN/TRAM domain-containing protein -
  LT978_RS19350 (LT978_19345) disA 3873298..3874380 (-) 1083 WP_003156401.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  LT978_RS19355 (LT978_19350) radA/sms 3874384..3875763 (-) 1380 WP_014304212.1 DNA repair protein RadA Machinery gene
  LT978_RS19360 (LT978_19355) clpC 3875857..3878289 (-) 2433 WP_007410388.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  LT978_RS19365 (LT978_19360) - 3878286..3879377 (-) 1092 WP_003156398.1 protein arginine kinase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40671.21 Da        Isoelectric Point: 5.5321

>NTDB_id=555749 LT978_RS19350 WP_003156401.1 3873298..3874380(-) (disA) [Bacillus amyloliquefaciens strain TL106]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATVEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=555749 LT978_RS19350 WP_003156401.1 3873298..3874380(-) (disA) [Bacillus amyloliquefaciens strain TL106]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATTCTGCAGTTCGTTGCACCGGGCACCCCGCT
CAGAGCCGGGATAGAGAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAAGGTAAAGCAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACGGCGGAACGGGTGGCGAAGCAGACCGGCTGTCTCGTCATCGCCATTTCTGAGCGCAGAAATG
TCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGGTTTTATTTTAACAAAGGCAAATCAGGCCATT
CAAACGCTCGAGAAGTATAAAACCATTTTAGACAAAACAATTACGGCTCTAAACGCGTTAGAGTTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCTGTCATGCATCGGTATGAAATGGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATGGAAGAAGAGGCGGCACTTTTC
ATCAAAGACTATGTCAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTCCAGGATATGTCCAGCTATGATCT
GCTGGATGATTCCATTCTGTTTAAACTGCTTGGATACCCGGCTTCTACGAATCTTGATGATTATGTGCTCCCGAGAGGCT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGATTTTTGCCAAGC
ATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTCGAGGGTATCGGCGAAGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTTCAGGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AAI8HS26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.444

100

0.944