Detailed information NTG0555708

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LT978_RS13535
• Genome accession: NZ_CP090838
• Coordinates: 2792866..2794026 (-)
• Length: 386 a.a.
• NCBI ID: WP_044053100.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain TL106
• Function: homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake

Genomic Context

Location: 2787866..2799026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LT978_RS13510 (LT978_13505)	-	2788106..2788792 (+)	687	WP_139890385.1	lytic transglycosylase domain-containing protein	-
LT978_RS13515 (LT978_13510)	-	2789021..2789419 (+)	399	WP_003155023.1	thiol management oxidoreductase	-
LT978_RS13520 (LT978_13515)	spxH	2789416..2790318 (+)	903	WP_024085126.1	protease adaptor protein SpxH	-
LT978_RS13525 (LT978_13520)	-	2790604..2790771 (+)	168	WP_003155026.1	hypothetical protein	-
LT978_RS13530 (LT978_13525)	pepF	2790809..2792638 (-)	1830	WP_024085125.1	oligoendopeptidase F	Regulator
LT978_RS13535 (LT978_13530)	coiA	2792866..2794026 (-)	1161	WP_044053100.1	competence protein CoiA family protein	Machinery gene
LT978_RS13540 (LT978_13535)	mecA	2794177..2794833 (-)	657	WP_003155032.1	adaptor protein MecA	Regulator
LT978_RS13550 (LT978_13545)	-	2795109..2795765 (+)	657	WP_057080091.1	TerC family protein	-
LT978_RS13555 (LT978_13550)	spx	2795823..2796218 (-)	396	WP_003155034.1	transcriptional regulator Spx	-
LT978_RS13560 (LT978_13555)	-	2796397..2796975 (-)	579	WP_003155035.1	GNAT family N-acetyltransferase	-
LT978_RS13565 (LT978_13560)	-	2797093..2798280 (-)	1188	WP_058905933.1	putative glycoside hydrolase	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 44331.09 Da
• Isoelectric Point: 10.0426

>NTDB_id=555708 LT978_RS13535 WP_044053100.1 2792866..2794026(-) (coiA) [Bacillus amyloliquefaciens strain TL106]
MFSAVTAGGRLIQLAGSYSKEKAAELRKKRWFCPVCKSELDIKLGREKLPHFAHKKSRLCPGESEPESEYHLEGKRQLFL
WLKTQGCSVSLEPYLTSAGQRPDLTAESGEERLAFEFQCANLSADSLKSRTAGLKNAGYRPVWIIGAKRLKRMAAQFFRL
SAFHWQFFEVNSFSSLMFYCPDARSFYRLHSITPFYTGYSYAGLTAIPLHKANLKDICHPEGRHSVRLSSWGRAVAGFRN
KDGRFLSEDAGLIRRLFYERHQVAFPFLPSEVFIPVSAGFVFASPVFVWQGHLYLRLAELSKKGAPIRLSGMVHDLRQKI
RHKEIRMRYGSQDSLIGMAVKQYADFLCLQDFLREIENEVYMPSSQQKRPQTAEELRRRDLLFFGE

Nucleotide

• Length: 1161 bp

>NTDB_id=555708 LT978_RS13535 WP_044053100.1 2792866..2794026(-) (coiA) [Bacillus amyloliquefaciens strain TL106]
ATGTTCAGTGCAGTGACTGCCGGCGGACGGCTCATTCAGCTGGCCGGAAGCTATTCAAAGGAAAAAGCGGCGGAGCTGAG
AAAGAAACGCTGGTTCTGCCCCGTTTGCAAAAGTGAGCTTGATATCAAACTGGGACGCGAAAAACTGCCGCACTTCGCTC
ATAAAAAAAGCAGGCTGTGTCCCGGGGAATCCGAACCTGAAAGCGAATACCATCTGGAAGGAAAAAGACAGCTTTTTCTC
TGGCTGAAGACACAAGGGTGCAGTGTCAGCCTGGAACCGTATCTGACTTCCGCTGGACAGCGGCCTGACTTGACGGCAGA
AAGCGGAGAAGAAAGGCTGGCTTTTGAATTTCAATGTGCGAACCTTTCGGCGGACTCTTTAAAGAGCCGGACGGCAGGCC
TGAAAAACGCCGGGTACCGGCCGGTCTGGATCATTGGGGCAAAACGGTTAAAACGGATGGCCGCGCAATTTTTCCGGCTT
TCTGCTTTTCACTGGCAGTTCTTTGAAGTCAATTCATTTTCCTCCTTAATGTTTTACTGCCCCGACGCCCGCTCCTTTTA
CAGGCTGCATTCCATCACTCCGTTTTACACCGGCTATTCTTATGCCGGCTTAACCGCAATCCCTCTTCACAAAGCAAACC
TGAAAGACATTTGTCATCCGGAAGGGCGGCACAGCGTCAGACTTTCCTCGTGGGGGCGTGCCGTTGCCGGCTTCCGCAAC
AAAGACGGGCGGTTTTTATCTGAAGATGCCGGTCTTATCCGGCGTCTTTTTTACGAAAGACATCAGGTTGCATTTCCATT
TCTCCCCTCTGAAGTGTTTATTCCCGTTTCAGCAGGCTTTGTGTTTGCAAGTCCCGTTTTTGTGTGGCAGGGCCATTTAT
ACTTGCGGCTTGCGGAACTTTCTAAAAAAGGCGCGCCGATCCGATTATCCGGCATGGTTCATGATTTACGGCAAAAAATC
AGGCATAAGGAGATCCGGATGCGGTATGGTTCACAAGACAGCCTTATCGGAATGGCGGTAAAACAATATGCTGATTTCTT
ATGCTTGCAGGATTTTTTAAGGGAAATTGAGAATGAAGTATATATGCCCTCATCTCAACAGAAGCGCCCTCAAACGGCAG
AAGAGCTGCGCCGGCGGGACCTGCTCTTTTTTGGGGAATGA

Domains

Predicted by InterProScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-362)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Bacillus subtilis subsp. subtilis str. 168	46.277	97.409	0.451