Detailed information NTG0555601

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LZ559_RS31950
• Genome accession: NZ_CP090837
• Coordinates: 7115215..7116237 (-)
• Length: 340 a.a.
• NCBI ID: WP_328284917.1
• Uniprot ID: -
• Organism: Streptomyces sp. R527F
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 7110215..7121237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ559_RS31925 (LZ559_31925)	-	7111005..7113185 (+)	2181	WP_234877579.1	ATP-binding protein	-
LZ559_RS31930 (LZ559_31930)	-	7113192..7113626 (+)	435	WP_030800682.1	roadblock/LC7 domain-containing protein	-
LZ559_RS31935 (LZ559_31935)	-	7113629..7114000 (+)	372	WP_030076475.1	DUF742 domain-containing protein	-
LZ559_RS31940 (LZ559_31940)	-	7113978..7114601 (+)	624	WP_030800679.1	ATP/GTP-binding protein	-
LZ559_RS31945 (LZ559_31945)	-	7114598..7115182 (+)	585	WP_030800678.1	GAF domain-containing protein	-
LZ559_RS31950 (LZ559_31950)	cytR	7115215..7116237 (-)	1023	WP_328284917.1	LacI family DNA-binding transcriptional regulator	Regulator
LZ559_RS31955 (LZ559_31955)	-	7116494..7117357 (+)	864	WP_073777613.1	ABC transporter permease	-
LZ559_RS31960 (LZ559_31960)	-	7117394..7118413 (+)	1020	WP_234877581.1	ABC transporter substrate-binding protein	-
LZ559_RS31965 (LZ559_31965)	-	7118410..7119240 (+)	831	WP_030800667.1	ABC transporter ATP-binding protein	-
LZ559_RS31970 (LZ559_31970)	-	7119422..7120372 (+)	951	WP_044373013.1	SDR family oxidoreductase	-
LZ559_RS31975 (LZ559_31975)	-	7120434..7121162 (-)	729	WP_318278051.1	sugar phosphate isomerase/epimerase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 35610.84 Da
• Isoelectric Point: 9.6680

>NTDB_id=555601 LZ559_RS31950 WP_328284917.1 7115215..7116237(-) (cytR) [Streptomyces sp. R527F]
MTLDAVAREAGVSLATASRALNGTTRVRDDLRGRVRAAADLLGYIPNAHAQALASAEGNRTVGLICHDVGDPYFAGIASG
VMRAAAEQDLLVMLASTFREPAREIAYVSMLRAQRARAILLIGSGFQDRAWERGMDAELEPYVRAGGRVAVVSRHRSMRV
DTVQPENRAGAAALAASLVELGHRDFAVLSGPPELTTVADRLAGFREGLAAAGITLRRVVRGAFTREGGHAAARQLLATG
VARPTCVFAVTDVMAVGALAALREAGVRVPEDMSLAGFDDIPVVREVSPPLTTVALPLTEMGEQVIALALRTPSGAGRSR
VLRIEGNVVLRGSTGAPPGS

Nucleotide

• Length: 1023 bp

>NTDB_id=555601 LZ559_RS31950 WP_328284917.1 7115215..7116237(-) (cytR) [Streptomyces sp. R527F]
GTGACGCTCGACGCGGTGGCGCGCGAGGCCGGCGTCTCGCTCGCCACCGCGTCCCGGGCCCTCAACGGCACCACCCGGGT
CCGCGACGATCTGCGCGGCCGGGTGCGCGCGGCGGCCGATCTCCTCGGCTACATCCCCAACGCCCATGCCCAGGCCCTCG
CCAGCGCCGAGGGCAACCGTACGGTGGGGCTGATCTGCCACGACGTGGGCGACCCGTACTTCGCGGGCATCGCGAGCGGG
GTGATGCGGGCGGCCGCCGAGCAGGATCTGCTGGTGATGCTCGCCTCCACTTTCCGGGAACCGGCGCGGGAGATCGCGTA
CGTCTCGATGCTGCGGGCCCAGCGGGCGCGGGCCATCCTGCTGATCGGCTCCGGCTTCCAGGACCGGGCCTGGGAGCGGG
GGATGGACGCCGAGCTGGAGCCGTACGTCCGGGCGGGCGGGCGGGTCGCGGTGGTCAGCCGGCACCGGTCGATGCGCGTG
GACACCGTCCAGCCGGAGAACCGGGCCGGGGCGGCGGCGCTCGCGGCCTCACTGGTGGAGTTGGGACACCGGGACTTCGC
GGTGCTCAGCGGTCCGCCCGAACTGACCACGGTGGCCGACCGATTGGCAGGGTTCCGTGAAGGGCTCGCCGCCGCGGGCA
TCACCCTTCGGCGGGTGGTGCGGGGCGCGTTCACCCGGGAGGGCGGGCACGCGGCGGCCCGCCAGCTGCTGGCCACCGGG
GTCGCGCGACCCACCTGCGTCTTCGCGGTGACCGATGTGATGGCGGTCGGCGCGCTGGCCGCGCTGCGGGAGGCCGGTGT
GCGCGTCCCCGAGGACATGTCGCTCGCGGGGTTCGACGACATCCCCGTCGTACGGGAGGTGTCGCCGCCGCTGACCACGG
TGGCGCTGCCGCTCACGGAGATGGGCGAGCAGGTGATCGCCCTCGCCCTGCGGACGCCGTCGGGGGCGGGGCGTTCCCGG
GTGCTGCGGATCGAGGGGAACGTGGTCCTGCGGGGCAGTACCGGTGCGCCGCCCGGGAGTTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (2-47)

• Periplasmic binding protein-like domain (Peripla_BP_3) (177-334)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	35.735	100	0.365