Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   LZ559_RS27870 Genome accession   NZ_CP090837
Coordinates   6149355..6150152 (-) Length   265 a.a.
NCBI ID   WP_010072358.1    Uniprot ID   A0ABZ1ZGP1
Organism   Streptomyces sp. R527F     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6144355..6155152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ559_RS27855 (LZ559_27855) - 6144510..6145235 (+) 726 WP_044370009.1 GNAT family N-acetyltransferase -
  LZ559_RS27860 (LZ559_27860) - 6145296..6147227 (+) 1932 WP_044370012.1 IucA/IucC family siderophore biosynthesis protein -
  LZ559_RS27865 (LZ559_27865) - 6147266..6149236 (+) 1971 WP_044370015.1 ATP-dependent DNA helicase -
  LZ559_RS27870 (LZ559_27870) dinR/lexA 6149355..6150152 (-) 798 WP_010072358.1 transcriptional repressor LexA Regulator
  LZ559_RS27875 (LZ559_27875) nrdR 6150653..6151165 (+) 513 WP_030577138.1 transcriptional regulator NrdR -
  LZ559_RS27880 (LZ559_27880) - 6151332..6154229 (+) 2898 WP_030802282.1 vitamin B12-dependent ribonucleotide reductase -
  LZ559_RS27885 (LZ559_27885) - 6154340..6154876 (-) 537 WP_030802280.1 TerD family protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28777.52 Da        Isoelectric Point: 7.4761

>NTDB_id=555594 LZ559_RS27870 WP_010072358.1 6149355..6150152(-) (dinR/lexA) [Streptomyces sp. R527F]
MTTTADSATITARDHRSQSRLEPVHAMNDSVTNTDGPEPARPGRSMPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPH
NAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=555594 LZ559_RS27870 WP_010072358.1 6149355..6150152(-) (dinR/lexA) [Streptomyces sp. R527F]
GTGACCACCACCGCAGACAGTGCCACCATCACCGCCCGGGACCACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCAT
GAATGACTCAGTCACGAACACGGACGGGCCCGAGCCCGCACGCCCCGGGCGTTCCATGCCCGGCAGGCCTCCCGGCATCC
GGGCGGACAGCTCGGGGCTCACGGACCGGCAGCGGCGGGTCATCGAGGTCATCCGCGACTCCGTGCAGCGGCGGGGTTAC
CCGCCCTCCATGCGGGAGATCGGTCAGGCGGTGGGCCTCTCCAGCACCTCGTCCGTCGCCCACCAGCTGATGGCCCTGGA
GCGCAAGGGCTTCCTCCGCCGGGACCCGCACCGCCCCCGTGCGTACGAGGTGCGCGGATCGGACCAGCCCAGCACCCAGC
CGACCGACACGACGGGCAAGCCCGCCGCGTCCTATGTGCCGCTGGTGGGCCGGATCGCCGCCGGTGGTCCGATCCTCGCC
GAGGAGTCCGTGGAAGACGTCTTCCCGCTCCCCCGCCAGCTCGTCGGCGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGG
CGACTCGATGATCGAGGCCGCGATCTGTGACGGCGACTGGGTCACCGTCCGCCGCCAGCCCGTCGCGGAGAACGGGGACA
TCGTCGCCGCCATGCTCGACGGCGAGGCCACGGTCAAGCGCTTCCGCCGGGAGGACGGTCACGTATGGCTGCTGCCTCAC
AACGCCGCGTACCAGCCGATCCCCGGCGACGAGGCGACCATCCTCGGCAAGGTGGTGGCGGTGCTGCGCCGGGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(147-259)

LexA DNA binding domain (LexA_DNA_bind)

(58-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80

0.37