Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SMUNUM_RS06755 Genome accession   NZ_AP014571
Coordinates   1391553..1392032 (-) Length   159 a.a.
NCBI ID   WP_002267187.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1386553..1397032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS06740 (SMNUM_1288) alsS 1387279..1388958 (-) 1680 WP_025989501.1 acetolactate synthase AlsS -
  SMUNUM_RS06745 (SMNUM_1289) - 1389091..1390323 (-) 1233 WP_019316498.1 tetratricopeptide repeat protein -
  SMUNUM_RS06750 (SMNUM_1290) - 1390313..1391482 (-) 1170 WP_002264617.1 AI-2E family transporter -
  SMUNUM_RS06755 (SMNUM_1291) mutX 1391553..1392032 (-) 480 WP_002267187.1 8-oxo-dGTP diphosphatase Machinery gene
  SMUNUM_RS06760 (SMNUM_1292) rfbB 1392327..1393373 (-) 1047 WP_002279604.1 dTDP-glucose 4,6-dehydratase -
  SMUNUM_RS06765 (SMNUM_1293) - 1393765..1393941 (-) 177 WP_002266207.1 hypothetical protein -
  SMUNUM_RS06770 (SMNUM_1294) - 1394004..1394600 (-) 597 WP_286215636.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  SMUNUM_RS06775 (SMNUM_1295) rfbA 1394602..1395471 (-) 870 WP_002296172.1 glucose-1-phosphate thymidylyltransferase RfbA -
  SMUNUM_RS06780 (SMNUM_1296) - 1395767..1396555 (-) 789 WP_002274121.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18916.58 Da        Isoelectric Point: 5.6576

>NTDB_id=55554 SMUNUM_RS06755 WP_002267187.1 1391553..1392032(-) (mutX) [Streptococcus mutans LP13]
MTKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=55554 SMUNUM_RS06755 WP_002267187.1 1391553..1392032(-) (mutX) [Streptococcus mutans LP13]
ATGACAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692

Multiple sequence alignment