Detailed information
Bioinformatically predicted
Overview
| Name | comFA | Type | Machinery gene |
| Locus tag | J8Y17_RS25635 | Genome accession | NZ_CP072769 |
| Coordinates | 4897479..4898828 (-) | Length | 449 a.a. |
| NCBI ID | WP_071728261.1 | Uniprot ID | A0A4S4HKD2 |
| Organism | Bacillus cereus strain BC07 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4892479..4903828
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8Y17_RS25615 (J8Y17_25615) | secA | 4892801..4895308 (-) | 2508 | WP_000579383.1 | preprotein translocase subunit SecA | - |
| J8Y17_RS25620 (J8Y17_25620) | raiA | 4895585..4896127 (-) | 543 | WP_000671189.1 | ribosome-associated translation inhibitor RaiA | - |
| J8Y17_RS25625 (J8Y17_25625) | cspC | 4896451..4896648 (-) | 198 | WP_001990088.1 | cold shock protein CspC | - |
| J8Y17_RS25630 (J8Y17_25630) | comFC | 4896775..4897479 (-) | 705 | WP_071728260.1 | comF operon protein ComFC | - |
| J8Y17_RS25635 (J8Y17_25635) | comFA | 4897479..4898828 (-) | 1350 | WP_071728261.1 | ATP-dependent helicase ComFA | Machinery gene |
| J8Y17_RS25640 (J8Y17_25640) | - | 4898956..4900269 (-) | 1314 | WP_211479738.1 | C40 family peptidase | - |
| J8Y17_RS25645 (J8Y17_25645) | - | 4900523..4900837 (-) | 315 | WP_000400857.1 | helix-turn-helix domain-containing protein | - |
| J8Y17_RS25650 (J8Y17_25650) | - | 4901011..4901853 (-) | 843 | WP_000844766.1 | DegV family protein | - |
| J8Y17_RS25655 (J8Y17_25655) | - | 4902093..4902728 (+) | 636 | WP_071728265.1 | YigZ family protein | - |
Sequence
Protein
Download Length: 449 a.a. Molecular weight: 51276.03 Da Isoelectric Point: 9.8912
>NTDB_id=555474 J8Y17_RS25635 WP_071728261.1 4897479..4898828(-) (comFA) [Bacillus cereus strain BC07]
MLAGKQLLLEELSSDLRRELSDLKKKGEVICVQGVIKKVSKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELNSLQWKGALTTGQELAAQGVIKAIQQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPRINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEMSLLLKGLDNRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID
MLAGKQLLLEELSSDLRRELSDLKKKGEVICVQGVIKKVSKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELNSLQWKGALTTGQELAAQGVIKAIQQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPRINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEMSLLLKGLDNRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID
Nucleotide
Download Length: 1350 bp
>NTDB_id=555474 J8Y17_RS25635 WP_071728261.1 4897479..4898828(-) (comFA) [Bacillus cereus strain BC07]
ATGCTTGCTGGGAAACAGTTACTATTAGAAGAACTCTCTTCAGACTTACGGAGAGAATTAAGTGATTTAAAAAAGAAGGG
AGAGGTTATATGTGTACAAGGTGTAATAAAGAAGGTTTCTAAATATATATGTCAGCGTTGTGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGTAGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGCGAAAGGGAATTAAATTCGTTACAGTGGAAAGGTGCATT
GACTACTGGTCAGGAGTTGGCGGCGCAAGGCGTCATAAAAGCGATTCAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGAGCTGGAAAAACAGAGATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCACGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTCATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCGGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATGAGCCTGTTATTGAAAGGGTTGGATAATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA
ATGCTTGCTGGGAAACAGTTACTATTAGAAGAACTCTCTTCAGACTTACGGAGAGAATTAAGTGATTTAAAAAAGAAGGG
AGAGGTTATATGTGTACAAGGTGTAATAAAGAAGGTTTCTAAATATATATGTCAGCGTTGTGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGTAGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGCGAAAGGGAATTAAATTCGTTACAGTGGAAAGGTGCATT
GACTACTGGTCAGGAGTTGGCGGCGCAAGGCGTCATAAAAGCGATTCAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGAGCTGGAAAAACAGAGATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCACGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTCATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCGGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATGAGCCTGTTATTGAAAGGGTTGGATAATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFA | Bacillus subtilis subsp. subtilis str. 168 |
50.679 |
98.441 |
0.499 |
| comFA | Latilactobacillus sakei subsp. sakei 23K |
41 |
89.087 |
0.365 |