Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   J8Y17_RS20725 Genome accession   NZ_CP072769
Coordinates   3984663..3985457 (-) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus strain BC07     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3979663..3990457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J8Y17_RS20705 (J8Y17_20705) - 3981466..3981699 (+) 234 WP_001190191.1 DUF2627 domain-containing protein -
  J8Y17_RS20710 (J8Y17_20710) - 3981748..3982476 (-) 729 WP_071728403.1 glycerophosphodiester phosphodiesterase -
  J8Y17_RS20715 (J8Y17_20715) - 3982527..3982673 (+) 147 WP_001247671.1 YycC family protein -
  J8Y17_RS20720 (J8Y17_20720) - 3982841..3984367 (-) 1527 WP_071728404.1 glycosyltransferase family 39 protein -
  J8Y17_RS20725 (J8Y17_20725) spo0A 3984663..3985457 (-) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  J8Y17_RS20730 (J8Y17_20730) spoIVB 3985745..3987043 (-) 1299 WP_002054681.1 SpoIVB peptidase -
  J8Y17_RS20735 (J8Y17_20735) recN 3987162..3988901 (-) 1740 WP_000947757.1 DNA repair protein RecN Machinery gene
  J8Y17_RS20740 (J8Y17_20740) argR 3989169..3989618 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=555461 J8Y17_RS20725 WP_003161566.1 3984663..3985457(-) (spo0A) [Bacillus cereus strain BC07]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=555461 J8Y17_RS20725 WP_003161566.1 3984663..3985457(-) (spo0A) [Bacillus cereus strain BC07]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAACAGCCAGATGTACTCG
TATTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTTATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818