Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   SMUNUM_RS04305 Genome accession   NZ_AP014571
Coordinates   865756..867528 (+) Length   590 a.a.
NCBI ID   WP_019805396.1    Uniprot ID   -
Organism   Streptococcus mutans LP13     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 860756..872528
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNUM_RS04295 (SMNUM_0801) - 861684..863552 (+) 1869 WP_002266716.1 ABC-F family ATP-binding cassette domain-containing protein -
  SMUNUM_RS04300 (SMNUM_0802) rcrP 864009..865745 (+) 1737 WP_019805395.1 ABC transporter ATP-binding protein Regulator
  SMUNUM_RS04305 (SMNUM_0803) rcrQ 865756..867528 (+) 1773 WP_019805396.1 ABC transporter ATP-binding protein Regulator
  SMUNUM_RS04310 (SMNUM_0804) - 867644..868564 (+) 921 WP_002269023.1 AEC family transporter -

Sequence


Protein


Download         Length: 590 a.a.        Molecular weight: 66769.57 Da        Isoelectric Point: 7.2589

>NTDB_id=55532 SMUNUM_RS04305 WP_019805396.1 865756..867528(+) (rcrQ) [Streptococcus mutans LP13]
MKKKTVFLRLWYYLKTYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDMTRGVQGAHLNISYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSEKINKIPISYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLCLNLTLAAILLVCIPLTYFSSRFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQINQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAIKVDNHGIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAAKAANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=55532 SMUNUM_RS04305 WP_019805396.1 865756..867528(+) (rcrQ) [Streptococcus mutans LP13]
ATGAAAAAGAAAACTGTTTTTTTACGCTTATGGTATTATTTGAAGACCTATAAAGGTTCACTTTTTTTGGCCATTTTCTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAACCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACCTAA
TTGATATGACTCGCGGAGTTCAAGGCGCTCATCTTAATATCAGTTATATCACCATGATTTTGTTTCTTTATTTTTTACGC
GGATTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGTATTTACGATTTGCG
TCATGATTTAAGTGAAAAGATTAATAAGATTCCCATTTCCTATTTTGATAAACATCAATTTGGTGATATGTTAGGACGTT
TTACTAATGACGTTGAAACGGTCTCTAACGCTTTGCAGCAGAGCTTTCTGCAAATTATTAATGCCTTTTTAACGATTATC
CTTGTTGTGGTTATGGTACTCTGCCTTAATTTGACCTTGGCGGCGATTCTTCTTGTTTGTATTCCGCTGACTTATTTCAG
TTCTCGTTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTCGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGACGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGCTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGTCTGCAGGTCTTAGCAGGGAGACTGACTATTGGTAATATGCAGGCCTTTG
TTCAATACATTTGGCAAATCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGACGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACCTTTCATAATGTCGCCTTTCAATATACTGAGGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCAATTAAAGTAGATAATCATGGTATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTGCGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCGGCCAAGGCAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGACGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTGTTAACCATAGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGCTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCGGATAAGATTCTTGTCCTTAAGGATGGTCAA
ATTATTGAACAAGGAAACCATCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

45.439

100

0.456


Multiple sequence alignment