Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | J2N67_RS14260 | Genome accession | NZ_CP072691 |
| Coordinates | 2768034..2770469 (-) | Length | 811 a.a. |
| NCBI ID | WP_252597838.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain IMBL-B9 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2763034..2775469
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J2N67_RS14240 (J2N67_002850) | ispD | 2763518..2764198 (-) | 681 | WP_000288282.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| J2N67_RS14245 (J2N67_002851) | - | 2764215..2765324 (-) | 1110 | WP_000919677.1 | PIN/TRAM domain-containing protein | - |
| J2N67_RS14250 (J2N67_002852) | disA | 2765485..2766558 (-) | 1074 | WP_000392158.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| J2N67_RS14255 (J2N67_002853) | radA | 2766562..2767938 (-) | 1377 | WP_001085202.1 | DNA repair protein RadA | Machinery gene |
| J2N67_RS14260 (J2N67_002854) | clpC | 2768034..2770469 (-) | 2436 | WP_252597838.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| J2N67_RS14265 (J2N67_002855) | - | 2770492..2771556 (-) | 1065 | WP_000050842.1 | protein arginine kinase | - |
| J2N67_RS14270 (J2N67_002856) | - | 2771561..2772109 (-) | 549 | WP_000128398.1 | UvrB/UvrC motif-containing protein | - |
| J2N67_RS14275 (J2N67_002857) | ctsR | 2772280..2772741 (-) | 462 | WP_001244565.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90563.41 Da Isoelectric Point: 6.3584
>NTDB_id=555196 J2N67_RS14260 WP_252597838.1 2768034..2770469(-) (clpC) [Bacillus thuringiensis strain IMBL-B9]
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPKLKELEVNLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSSTNAN
TPTLDSLARDLTVVARENRLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIHVDEPSLEESTQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA
SKVRLRSYTTPPKLKELEVNLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV
VSTWTRIPVSKLAQTETDKLLNLESILHDRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI
QEIVTLMVNQLVNRLKEQEIELQLTEGAIAAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE
TFVIHSAEKVK
Nucleotide
Download Length: 2436 bp
>NTDB_id=555196 J2N67_RS14260 WP_252597838.1 2768034..2770469(-) (clpC) [Bacillus thuringiensis strain IMBL-B9]
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTGAGCCCGGAGAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTCAGCCTTAACAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAACGAGGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCCAAT
ACACCGACACTAGACAGTTTAGCGCGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAGCCTGGTGTAG
GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACATTAATCGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCAAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA
ATCAACTCAAATCTTGAAAGGTTTACGCGATCGTTATGAGGCCCATCACCGTGTGTCTATTACAGATGATGCAATTGATG
CAGCTGTGAAACTTTCCGATCGTTATATTACGGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGTTCTTATACAACACCACCAAAATTAAAAGAGCTTGAAGTGAATCTTGAGGAAATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT
TGGAAGATACAAAGCGTCAGTGGAAAGAACAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTGTCATCGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGACTGAAAG
ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCATTGGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT
AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCGTATTCAG
TTGTCCTATTAGATGAAGTAGAGAAGGCGCATCCTGATGTATTTAATATTTTACTACAGGTATTGGAAGATGGTCGTTTA
ACTGATTCTAAAGGACGTACAGTTGACTTCCGTAATACGATTGTTATTATGACGTCTAACGTTGGTGCTGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGTCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCAATTAACAGAAGG
GGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGCATTGGGCATAA
TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCGTTAATTGCTCTTG
GATTGAGCCCGGAGAAAGTGCAAAAAGAGGTAGAAGCGTTAATTGGACGTGGAACAGAAGCTTCTCAAACTGTACATTAT
ACACCTCGTGCTAAAAAAGTTATTGAATTGTCTATGGATGAAGCGCGTAAGCTAGGACATTCTTACGTTGGAACAGAACA
TATTTTACTTGGCTTAATCCGTGAAGGTGAAGGTGTAGCGGCACGTGTTTTAAATAATTTAGGCGTCAGCCTTAACAAAG
CAAGACAACAAGTGTTACAACTTCTTGGAAGTAACGAGGCAAGTTCAGGTCACCAAGGTGGTTCATCGACAAATGCCAAT
ACACCGACACTAGACAGTTTAGCGCGCGACTTAACAGTTGTTGCACGTGAGAATCGTTTGGATCCTGTTATTGGACGTAG
TAAAGAAATTCAACGTGTAATTGAAGTGTTAAGCCGTAGAACAAAAAACAATCCAGTGTTAATTGGAGAGCCTGGTGTAG
GTAAAACAGCAATTGCTGAAGGGTTAGCACAGCAAATCGTAAATAATGAAGTTCCTGAAACGTTAAGAGATAAGCGTGTT
ATGACACTAGATATGGGAACAGTGGTAGCTGGGACGAAATATCGTGGTGAGTTTGAAGATCGTTTAAAGAAAGTAATGGA
TGAAATACGTCAAGCAGGGAATATTATTCTATTTATTGATGAACTTCATACATTAATCGGTGCAGGTGGAGCAGAAGGTG
CAATCGATGCATCAAATATTTTAAAACCATCTTTAGCACGCGGAGAATTACAATGTATTGGTGCGACAACTTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCAGCTTTAGAGAGACGTTTCCAGCCAATTCATGTTGATGAGCCGAGTCTAGAAGA
ATCAACTCAAATCTTGAAAGGTTTACGCGATCGTTATGAGGCCCATCACCGTGTGTCTATTACAGATGATGCAATTGATG
CAGCTGTGAAACTTTCCGATCGTTATATTACGGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT
TCAAAGGTTCGCTTACGTTCTTATACAACACCACCAAAATTAAAAGAGCTTGAAGTGAATCTTGAGGAAATTCGAAAAGA
AAAAGATGCGGCTGTACAAAGTCAAGAGTTTGAAAAGGCTGCTTCCTTACGTGATATGGAACAACGCTTACGTGAGAAAT
TGGAAGATACAAAGCGTCAGTGGAAAGAACAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC
GTTTCTACATGGACACGTATCCCTGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAACTTAGAATCCATTCT
TCATGATCGTGTCATCGGCCAGGATGAAGCGGTAGTGGCTGTAGCGAAAGCTGTTCGTCGTGCAAGAGCAGGACTGAAAG
ATCCGAAACGTCCAATTGGTTCATTTATTTTCTTAGGACCAACAGGTGTAGGTAAAACAGAATTAGCAAGAGCATTGGCA
GAATCTATGTTCGGTGATGAGGATGCAATGATTCGCATTGATATGTCTGAGTATATGGAGAAACATTCAACTTCTCGCTT
AGTTGGTTCTCCTCCAGGATATGTTGGGTATGAAGAAGGCGGACAATTAACAGAGAAGGTTCGTCGTAAGCCGTATTCAG
TTGTCCTATTAGATGAAGTAGAGAAGGCGCATCCTGATGTATTTAATATTTTACTACAGGTATTGGAAGATGGTCGTTTA
ACTGATTCTAAAGGACGTACAGTTGACTTCCGTAATACGATTGTTATTATGACGTCTAACGTTGGTGCTGAGGCGTTAAA
ACGTAACAAACATCTTGGATTTAACGTACAAGATGAAAGTCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC
TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT
CAAGAAATTGTGACTCTTATGGTAAATCAGTTAGTGAATCGCTTAAAAGAACAAGAAATTGAATTGCAATTAACAGAAGG
GGCGATTGCAGCTATTGCTGATAAAGGGTTTGATCGTGAATATGGTGCTCGTCCACTACGTAGAGCAATTCAGAAGCATG
TAGAAGATAGACTATCGGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGGGAA
ACATTTGTCATTCATAGTGCTGAAAAGGTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
85.802 |
99.877 |
0.857 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.5 |
98.644 |
0.498 |
| clpC | Streptococcus thermophilus LMD-9 |
45.718 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
45 |
100 |
0.466 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.476 |
100 |
0.465 |
| clpC | Streptococcus pneumoniae D39 |
46.801 |
98.274 |
0.46 |
| clpC | Streptococcus pneumoniae Rx1 |
46.801 |
98.274 |
0.46 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.5 |
98.644 |
0.459 |
| clpE | Streptococcus mutans UA159 |
53.538 |
80.148 |
0.429 |
| clpE | Streptococcus pneumoniae R6 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.55 |
79.778 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.55 |
79.778 |
0.419 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.735 |
78.175 |
0.404 |