Detailed information NTG0555133

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LZG50_RS20545
• Genome accession: NZ_CP090611
• Coordinates: 4184554..4185579 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli isolate DCE7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4179554..4190579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZG50_RS20525 (LZG50_20525)	metJ	4180738..4181055 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LZG50_RS20530 (LZG50_20530)	yiiX	4181115..4181723 (+)	609	WP_000702316.1	YiiX family permuted papain-like enzyme	-
LZG50_RS20535 (LZG50_20535)	rpmE	4181785..4181997 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LZG50_RS20540 (LZG50_20540)	priA	4182200..4184398 (+)	2199	WP_001340148.1	primosomal protein N'	Machinery gene
LZG50_RS20545 (LZG50_20545)	cytR	4184554..4185579 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
LZG50_RS20550 (LZG50_20550)	ftsN	4185671..4186630 (+)	960	WP_071791555.1	cell division protein FtsN	-
LZG50_RS20555 (LZG50_20555)	hslV	4186723..4187253 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LZG50_RS20560 (LZG50_20560)	hslU	4187263..4188594 (+)	1332	WP_024241700.1	HslU--HslV peptidase ATPase subunit	-
LZG50_RS20565 (LZG50_20565)	menA	4188661..4189587 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LZG50_RS20570 (LZG50_20570)	rraA	4189680..4190165 (+)	486	WP_024241699.1	ribonuclease E activity regulator RraA	-
LZG50_RS20575 (LZG50_20575)	zapB	4190250..4190495 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=555133 LZG50_RS20545 WP_000644904.1 4184554..4185579(+) (cytR) [Escherichia coli isolate DCE7]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=555133 LZG50_RS20545 WP_000644904.1 4184554..4185579(+) (cytR) [Escherichia coli isolate DCE7]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628