Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LQQ45_RS12745 | Genome accession | NZ_CP090607 |
| Coordinates | 2495408..2496514 (-) | Length | 368 a.a. |
| NCBI ID | WP_001187344.1 | Uniprot ID | A0A0D5YHX9 |
| Organism | Acinetobacter baumannii strain MRSN 58 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2490408..2501514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQQ45_RS12715 (LQQ45_12715) | - | 2490525..2492111 (+) | 1587 | WP_000622645.1 | cytochrome ubiquinol oxidase subunit I | - |
| LQQ45_RS12720 (LQQ45_12720) | cydB | 2492108..2493253 (+) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
| LQQ45_RS12725 (LQQ45_12725) | cydX | 2493267..2493368 (+) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| LQQ45_RS12730 (LQQ45_12730) | - | 2493369..2493668 (+) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| LQQ45_RS12735 (LQQ45_12735) | - | 2493726..2494397 (-) | 672 | WP_000175346.1 | DUF2057 domain-containing protein | - |
| LQQ45_RS12740 (LQQ45_12740) | - | 2494623..2495219 (-) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| LQQ45_RS12745 (LQQ45_12745) | pilA | 2495408..2496514 (-) | 1107 | WP_001187344.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| LQQ45_RS12750 (LQQ45_12750) | - | 2496622..2496948 (-) | 327 | WP_000955082.1 | hypothetical protein | - |
| LQQ45_RS12755 (LQQ45_12755) | - | 2497049..2497408 (-) | 360 | WP_000185571.1 | hypothetical protein | - |
| LQQ45_RS12760 (LQQ45_12760) | - | 2497624..2497857 (+) | 234 | WP_000616034.1 | hypothetical protein | - |
| LQQ45_RS12765 (LQQ45_12765) | - | 2498292..2498666 (+) | 375 | WP_012300584.1 | DUF2750 domain-containing protein | - |
| LQQ45_RS12770 (LQQ45_12770) | - | 2498807..2499238 (+) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| LQQ45_RS12775 (LQQ45_12775) | - | 2499289..2500497 (-) | 1209 | WP_000129940.1 | aspartate aminotransferase family protein | - |
| LQQ45_RS12780 (LQQ45_12780) | grxD | 2500725..2501066 (+) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| LQQ45_RS12785 (LQQ45_12785) | - | 2501113..2501436 (-) | 324 | WP_000121848.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39923.71 Da Isoelectric Point: 4.9872
>NTDB_id=555033 LQQ45_RS12745 WP_001187344.1 2495408..2496514(-) (pilA) [Acinetobacter baumannii strain MRSN 58]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTETEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTETEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=555033 LQQ45_RS12745 WP_001187344.1 2495408..2496514(-) (pilA) [Acinetobacter baumannii strain MRSN 58]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCGT
CTACAGAAACTGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCGT
CTACAGAAACTGAGCAACCAAAATCTGGTTTCTTTGGGCGAATGAAAGAAGGCTTGAGCAAAACTCGTCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.751 |
83.967 |
0.443 |