Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LZ752_RS04610 Genome accession   NZ_CP090518
Coordinates   1081275..1081691 (+) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   B2I4N3
Organism   Xylella fastidiosa subsp. fastidiosa strain Stag's Leap     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1076275..1086691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ752_RS04595 (LZ752_04595) - 1078074..1078883 (-) 810 WP_011097814.1 DUF6216 family protein -
  LZ752_RS04600 (LZ752_04600) - 1079198..1080073 (-) 876 WP_012382557.1 energy transducer TonB -
  LZ752_RS04605 (LZ752_04605) gshB 1080075..1081019 (-) 945 WP_004572847.1 glutathione synthase -
  LZ752_RS04610 (LZ752_04610) pilG 1081275..1081691 (+) 417 WP_004085459.1 response regulator Regulator
  LZ752_RS04615 (LZ752_04615) - 1081708..1082238 (+) 531 WP_004085458.1 chemotaxis protein CheW -
  LZ752_RS04620 (LZ752_04620) - 1082278..1084320 (+) 2043 WP_004572848.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=554772 LZ752_RS04610 WP_004085459.1 1081275..1081691(+) (pilG) [Xylella fastidiosa subsp. fastidiosa strain Stag's Leap]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=554772 LZ752_RS04610 WP_004085459.1 1081275..1081691(+) (pilG) [Xylella fastidiosa subsp. fastidiosa strain Stag's Leap]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATTGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCTTCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B2I4N3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652