Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   J8G07_RS19450 Genome accession   NZ_CP072612
Coordinates   388413..388577 (-) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain G10     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 383413..393577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J8G07_RS19450 comS 388413..388577 (-) 165 WP_269194677.1 competence protein ComS Regulator
  J8G07_RS19455 srfAB 388642..391686 (-) 3045 Protein_382 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=554663 J8G07_RS19450 WP_269194677.1 388413..388577(-) (comS) [Bacillus amyloliquefaciens strain G10]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=554663 J8G07_RS19450 WP_269194677.1 388413..388577(-) (comS) [Bacillus amyloliquefaciens strain G10]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5