Detailed information NTG0554576

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LZ754_RS01835
• Genome accession: NZ_CP090511
• Coordinates: 447683..450160 (+)
• Length: 825 a.a.
• NCBI ID: WP_027700427.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 442683..455160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ754_RS01810 (LZ754_01810)	-	443796..444581 (+)	786	WP_004085195.1	succinate dehydrogenase iron-sulfur subunit	-
LZ754_RS01815 (LZ754_01815)	-	444702..444950 (+)	249	WP_004085194.1	succinate dehydrogenase assembly factor 2	-
LZ754_RS01820 (LZ754_01820)	-	444901..445353 (+)	453	WP_004089278.1	hypothetical protein	-
LZ754_RS01825 (LZ754_01825)	-	445379..446620 (+)	1242	WP_004085192.1	lipoprotein-releasing ABC transporter permease subunit	-
LZ754_RS01830 (LZ754_01830)	lolD	446613..447335 (+)	723	WP_004085191.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LZ754_RS01835 (LZ754_01835)	comA	447683..450160 (+)	2478	WP_027700427.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LZ754_RS01840 (LZ754_01840)	exbB	450145..450807 (+)	663	WP_004085189.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
LZ754_RS01845 (LZ754_01845)	-	450812..451249 (+)	438	WP_004089267.1	biopolymer transporter ExbD	-
LZ754_RS01850 (LZ754_01850)	msbA	451267..453015 (+)	1749	WP_004085187.1	lipid A export permease/ATP-binding protein MsbA	-
LZ754_RS01855 (LZ754_01855)	lpxK	453012..454031 (+)	1020	WP_004085186.1	tetraacyldisaccharide 4'-kinase	-

Sequence

Protein

• Length: 825 a.a.
• Molecular weight: 90741.70 Da
• Isoelectric Point: 9.4516

>NTDB_id=554576 LZ754_RS01835 WP_027700427.1 447683..450160(+) (comA) [Xylella fastidiosa subsp. multiplex strain Oak 35874]
MDDMKPEQRHVLQRCWVDVLSVTRHATCLRYLAFPALLPSAVALLLGCLAALTLPRLPPVWVLWIFLFVGVMLAVIVRRV
AWCGVVLFGFANCCLHGQFGLRHQLSLALEGRDLVLRGRIVSLPVPETRRTRFLLRVDTDQDQEPALRGRLLQLSWYDEN
KAVAPGPRSELHAGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMARELAAATGINAWRERMSARIAD
AVLLEASVYLRALALGDTRGLSQQDWEVLRATGLTHLIAISGFHVGMVAGACALLVSLLWRVFPHLAWRWPRPLAMALIA
VPAAAGYTVLAGASLPTVRTALMIGIVALARLTRRRAMPGHVLGLALLVVLVWDPLAILSAGFWLSFAGVAWLLWCMQDG
HAAPWRGFLSAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSPMWRLGGNCFQW
SWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRGTPGKWLALLLWLPLLWPERERPRPGEFEMQMLDVGQGLS
IVVRTSGHTLLYDAGPAVNDGFDAGERVVVPALRASGIRRLDALVASHADSDHVGGLPAVLKAYPVDISYAPPDAPLDVQ
RRCSAGDSWLWDGVQFRFLHPAPHSRYLGNESSCVLRIDTRWGSALLTGDIGKVVERGLLSQDRESVRADVVVVPHHGSA
GSSSLGFVRAVNARLALVSSGDGNRFGHPRCSVVESWSETADVLLTAHSGAVRIWVGQQGLQLRERRVWRRRFWDAVERR
RSAAILSATEDVSKERRRNETCWNW

Nucleotide

• Length: 2478 bp

>NTDB_id=554576 LZ754_RS01835 WP_027700427.1 447683..450160(+) (comA) [Xylella fastidiosa subsp. multiplex strain Oak 35874]
ATGGACGATATGAAACCCGAGCAGCGACACGTGTTGCAGCGATGTTGGGTTGACGTGTTAAGTGTGACCCGGCACGCAAC
GTGCTTGCGTTACCTCGCGTTTCCGGCGTTGTTGCCGAGTGCTGTTGCGTTGCTGCTGGGTTGTCTTGCTGCACTCACCT
TGCCGCGATTACCGCCCGTATGGGTGTTGTGGATTTTTCTGTTTGTCGGAGTAATGCTCGCTGTTATCGTGCGCCGTGTT
GCTTGGTGCGGTGTGGTGTTGTTTGGTTTTGCTAACTGTTGCTTGCATGGTCAGTTTGGTTTGCGACATCAATTGTCGTT
AGCGTTGGAGGGCCGCGATCTGGTGTTACGTGGTCGGATCGTTTCTTTGCCGGTTCCAGAGACCAGGCGCACACGTTTCT
TGTTGCGTGTGGATACCGATCAAGATCAGGAACCAGCGCTGCGTGGTCGACTGCTGCAGTTATCCTGGTATGACGAGAAT
AAGGCGGTAGCACCGGGGCCACGCAGTGAATTGCATGCTGGATCTGTATGGCAGCTGCACGTGCGTCTGCGTGCGCCGCA
CAGTTTGCTGAATCCCGGAGGTTTCGACAGCGAGCGTTATGCCCTAGCCCAGGGGATTGTTGCGACCGGTTACGTACGTG
CGCCGACGATGGCACGTGAGCTGGCGGCAGCCACTGGCATCAATGCTTGGCGGGAACGGATGTCTGCGCGTATTGCTGAT
GCGGTGTTGTTGGAAGCATCGGTGTATTTACGTGCGTTGGCCTTGGGTGATACCCGGGGTTTGTCTCAACAGGATTGGGA
AGTATTGCGCGCTACAGGGCTGACGCATTTGATTGCGATCTCGGGGTTCCATGTCGGTATGGTCGCTGGTGCCTGTGCGT
TGCTTGTGTCGTTGCTGTGGCGAGTTTTCCCACATTTGGCGTGGCGTTGGCCGCGGCCACTCGCTATGGCACTCATTGCG
GTACCGGCCGCAGCCGGCTACACCGTCCTGGCTGGGGCGTCACTGCCCACAGTGAGAACCGCTTTGATGATCGGCATCGT
CGCATTGGCGCGCCTCACTCGGCGTCGTGCCATGCCGGGTCATGTCCTGGGGCTTGCCTTGCTTGTCGTACTGGTTTGGG
ATCCATTAGCCATTCTTAGTGCTGGCTTCTGGCTCAGCTTTGCCGGTGTCGCTTGGTTACTGTGGTGTATGCAAGACGGT
CATGCCGCGCCTTGGCGTGGCTTCTTATCGGCACAAGGTGTTGCAACCCTTGGGTTATTACCATTCACCGTGGCTTTATT
TGGTCAGGTTTCGTTTGTTGGGCCTTTGGCTAACTTGATTGCGATTCCGTTATGGACCTTTGTCGTTGTACCGCTGGCGT
TGTTAGGGACTGCGCTGGAAGCGTTAGTGCCAGGGTGGGGTAGCCCCATGTGGCGTTTGGGGGGGAATTGTTTCCAATGG
AGTTGGCAGCTATTCGAATACTTGGCACAGACTGATTTCGCATTGTGGTGGTTGCCGGAATCTGATGGTGTTGCATTGGG
GTTGGCCTTGCTGGGAGCGTTTTGGTTGCTGTTACCACGCGGTACGCCTGGTAAGTGGTTGGCGCTGTTGCTGTGGTTGC
CTTTGTTGTGGCCTGAGCGTGAGCGTCCCCGCCCCGGGGAGTTTGAGATGCAGATGCTGGACGTGGGGCAAGGACTGTCG
ATTGTGGTGCGTACCTCAGGCCATACGTTGTTGTACGACGCAGGTCCAGCAGTGAATGATGGTTTCGATGCCGGTGAGCG
TGTTGTGGTGCCGGCATTACGTGCCAGTGGCATCCGTCGCTTGGATGCATTGGTGGCTAGTCATGCTGATAGTGATCACG
TCGGAGGTTTGCCCGCAGTCCTGAAGGCTTATCCGGTTGATATCAGCTACGCTCCTCCGGATGCTCCACTCGACGTTCAG
CGCCGTTGCAGTGCTGGGGACAGTTGGCTGTGGGATGGAGTCCAGTTTCGTTTCTTACATCCTGCACCGCATTCGAGGTA
TTTAGGTAACGAGTCCAGTTGTGTATTGCGTATCGACACGCGCTGGGGCAGTGCTTTGTTGACGGGTGACATCGGCAAAG
TGGTCGAACGTGGTTTATTGAGTCAGGATCGTGAGAGTGTACGTGCCGATGTGGTGGTCGTACCGCATCATGGGAGCGCC
GGTTCTTCCTCGCTTGGGTTTGTCCGTGCGGTTAATGCGCGGTTAGCTTTGGTATCCAGTGGTGATGGTAACCGCTTCGG
TCATCCGCGCTGTTCGGTGGTGGAGAGCTGGAGTGAAACGGCAGATGTGTTGCTTACTGCGCATAGCGGCGCAGTACGGA
TTTGGGTTGGACAGCAGGGTCTGCAGTTACGTGAACGCCGTGTTTGGCGTCGTCGATTTTGGGATGCGGTCGAACGTCGC
CGATCCGCTGCTATCCTATCCGCCACTGAAGATGTATCCAAAGAGCGTCGGAGAAACGAGACATGCTGGAACTGGTAA

Domains

Predicted by InterProScan.

• Domain of unknown function (DUF4131) (DUF4131) (59-216)

• Competence protein (Competence) (253-520)

• Metallo-beta-lactamase superfamily (Lactamase_B) (554-722)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Ralstonia pseudosolanacearum GMI1000	37.711	100	0.379