Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LZ759_RS04825 Genome accession   NZ_CP090510
Coordinates   1128496..1128912 (+) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   B2I4N3
Organism   Xylella fastidiosa subsp. multiplex strain LA-Y3C     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123496..1133912
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ759_RS04810 (LZ759_04810) - 1125301..1126110 (-) 810 WP_222927431.1 DUF6216 family protein -
  LZ759_RS04815 (LZ759_04815) - 1126419..1127294 (-) 876 WP_004085461.1 energy transducer TonB -
  LZ759_RS04820 (LZ759_04820) gshB 1127296..1128240 (-) 945 WP_004085460.1 glutathione synthase -
  LZ759_RS04825 (LZ759_04825) pilG 1128496..1128912 (+) 417 WP_004085459.1 response regulator Regulator
  LZ759_RS04830 (LZ759_04830) - 1128929..1129459 (+) 531 WP_004085458.1 chemotaxis protein CheW -
  LZ759_RS04835 (LZ759_04835) - 1129499..1131541 (+) 2043 WP_071869554.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=554536 LZ759_RS04825 WP_004085459.1 1128496..1128912(+) (pilG) [Xylella fastidiosa subsp. multiplex strain LA-Y3C]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=554536 LZ759_RS04825 WP_004085459.1 1128496..1128912(+) (pilG) [Xylella fastidiosa subsp. multiplex strain LA-Y3C]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATCGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCATCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B2I4N3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652