Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LZ758_RS06480 Genome accession   NZ_CP090508
Coordinates   1381333..1381749 (-) Length   138 a.a.
NCBI ID   WP_004085459.1    Uniprot ID   B2I4N3
Organism   Xylella fastidiosa subsp. morus strain Riv11     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376333..1386749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ758_RS06470 (LZ758_06470) - 1378704..1380746 (-) 2043 WP_038229311.1 methyl-accepting chemotaxis protein -
  LZ758_RS06475 (LZ758_06475) - 1380786..1381316 (-) 531 WP_004085458.1 chemotaxis protein CheW -
  LZ758_RS06480 (LZ758_06480) pilG 1381333..1381749 (-) 417 WP_004085459.1 response regulator Regulator
  LZ758_RS06485 (LZ758_06485) gshB 1382005..1382949 (+) 945 WP_004572847.1 glutathione synthase -
  LZ758_RS06490 (LZ758_06490) - 1382951..1383826 (+) 876 WP_012382557.1 energy transducer TonB -
  LZ758_RS06495 (LZ758_06495) - 1384135..1384944 (+) 810 WP_038229308.1 DUF6216 family protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 15325.02 Da        Isoelectric Point: 9.7976

>NTDB_id=554480 LZ758_RS06480 WP_004085459.1 1381333..1381749(-) (pilG) [Xylella fastidiosa subsp. morus strain Riv11]
MIKSVASGKELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQKSQIIFVDIMMPRLDGYQTCALIK
NNNLFKSTPVIMLSSKDGLFDKARGRVVGSEQYLTKPFTREELLSAIRTYVNPLKLAV

Nucleotide


Download         Length: 417 bp        

>NTDB_id=554480 LZ758_RS06480 WP_004085459.1 1381333..1381749(-) (pilG) [Xylella fastidiosa subsp. morus strain Riv11]
ATGATTAAAAGTGTTGCTAGCGGCAAGGAACTCGCAGGTCTTAGGGTGATGGTCATTGATGACTCAAAAACCATAAGACG
TACCGCTGAAACGCTTCTTAAGCGTGAAGGGTGTGAGGTGGTTACCGCTATTGATGGCTTTGAAGCCTTAGCGAAAATTG
CTGATCAGAAGTCGCAGATTATTTTTGTCGATATTATGATGCCGCGCTTGGATGGTTATCAAACTTGCGCGTTGATAAAA
AACAATAACTTGTTTAAGTCGACTCCAGTGATCATGCTTTCTTCTAAAGATGGCTTATTCGATAAGGCGCGCGGTCGTGT
GGTTGGTTCCGAACAATATCTGACCAAACCTTTTACACGCGAGGAGTTGTTAAGTGCCATCCGTACATATGTTAATCCTT
TAAAATTAGCTGTTTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B2I4N3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.77

88.406

0.652