Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J5226_RS10295 Genome accession   NZ_CP072597
Coordinates   2406385..2406783 (+) Length   132 a.a.
NCBI ID   WP_031372856.1    Uniprot ID   A0AAU8MXI9
Organism   Lysobacter sp. K5869     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2401385..2411783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5226_RS10270 (J5226_10275) - 2401698..2402105 (+) 408 WP_215839817.1 VOC family protein -
  J5226_RS10275 (J5226_10280) tsaB 2402224..2402958 (+) 735 WP_215839818.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  J5226_RS10280 (J5226_10285) - 2402984..2404132 (+) 1149 WP_215839819.1 hypothetical protein -
  J5226_RS10285 (J5226_10290) - 2404208..2405092 (-) 885 WP_215839820.1 energy transducer TonB -
  J5226_RS10290 (J5226_10295) gshB 2405089..2406051 (-) 963 WP_215839821.1 glutathione synthase -
  J5226_RS10295 (J5226_10300) pilG 2406385..2406783 (+) 399 WP_031372856.1 twitching motility response regulator PilG Regulator
  J5226_RS10300 (J5226_10305) - 2406801..2407166 (+) 366 WP_215839822.1 response regulator -
  J5226_RS10305 (J5226_10310) - 2407177..2407716 (+) 540 WP_215840379.1 chemotaxis protein CheW -
  J5226_RS10310 (J5226_10315) - 2407772..2409790 (+) 2019 WP_215839823.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14822.24 Da        Isoelectric Point: 7.1364

>NTDB_id=554465 J5226_RS10295 WP_031372856.1 2406385..2406783(+) (pilG) [Lysobacter sp. K5869]
MLDEVRSGSLDGLRVMVIDDSKTIRRTAETLLKREGCEVVTAIDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIKN
NQLFKGTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLDAIRKHVHA

Nucleotide


Download         Length: 399 bp        

>NTDB_id=554465 J5226_RS10295 WP_031372856.1 2406385..2406783(+) (pilG) [Lysobacter sp. K5869]
ATGCTCGACGAGGTTCGTAGCGGCAGCCTCGATGGTCTCAGGGTCATGGTGATCGACGATTCCAAGACCATCCGTCGAAC
CGCCGAGACGCTGTTGAAACGCGAAGGATGCGAGGTGGTCACGGCCATCGACGGATTCGAGGCGTTGGCGAAGATCGCCG
ACCAACAGCCGCAAATCATTTTCGTGGATATCATGATGCCGCGTCTGGACGGCTATCAGACGTGCGCGCTCATCAAGAAC
AATCAATTGTTCAAGGGCACGCCGGTCATCATGCTGTCCTCCAAGGATGGGTTGTTCGACAAGGCGCGGGGCCGCATCGT
CGGTTCCGAGCAATACCTGACCAAGCCATTCACGCGCGAGGAACTCCTCGACGCGATCCGCAAGCACGTACACGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

93.939

0.697