Detailed information NTG0554362

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LZ755_RS06585
• Genome accession: NZ_CP090504
• Coordinates: 1372554..1373747 (-)
• Length: 397 a.a.
• NCBI ID: WP_038229334.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. morus strain Riv25
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1367554..1378747

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZ755_RS06555 (LZ755_06555)	ruvA	1368337..1368921 (-)	585	WP_038229340.1	Holliday junction branch migration protein RuvA	-
LZ755_RS06560 (LZ755_06560)	ruvC	1369007..1369528 (-)	522	WP_011097831.1	crossover junction endodeoxyribonuclease RuvC	-
LZ755_RS06565 (LZ755_06565)	-	1369648..1370382 (-)	735	WP_004572895.1	YebC/PmpR family DNA-binding transcriptional regulator	-
LZ755_RS06570 (LZ755_06570)	-	1370511..1371044 (-)	534	WP_230577690.1	DUF2726 domain-containing protein	-
LZ755_RS06575 (LZ755_06575)	-	1371098..1371370 (-)	273	WP_011097829.1	oxidative damage protection protein	-
LZ755_RS06580 (LZ755_06580)	mutY	1371405..1372454 (-)	1050	WP_038229336.1	A/G-specific adenine glycosylase	-
LZ755_RS06585 (LZ755_06585)	pilA	1372554..1373747 (-)	1194	WP_038229334.1	signal recognition particle-docking protein FtsY	Machinery gene
LZ755_RS06590 (LZ755_06590)	-	1374319..1374792 (+)	474	WP_004572890.1	hypothetical protein	-
LZ755_RS06595 (LZ755_06595)	-	1375108..1375722 (+)	615	WP_080679683.1	HNH endonuclease	-
LZ755_RS06600 (LZ755_06600)	-	1375930..1376736 (-)	807	WP_004572888.1	TatD family hydrolase	-
LZ755_RS06605 (LZ755_06605)	-	1377371..1378573 (+)	1203	WP_080679682.1	anthranilate synthase component I family protein	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 42796.93 Da
• Isoelectric Point: 6.7679

>NTDB_id=554362 LZ755_RS06585 WP_038229334.1 1372554..1373747(-) (pilA) [Xylella fastidiosa subsp. morus strain Riv25]
MLSFLRLKKPTNAISDNERSKYSAEEMAAAFPKAPSLDDAPDQEQTSTTPLLSSADQPALLTHSTSSAFTELAISTGDDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSTEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTCLVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA

Nucleotide

• Length: 1194 bp

>NTDB_id=554362 LZ755_RS06585 WP_038229334.1 1372554..1373747(-) (pilA) [Xylella fastidiosa subsp. morus strain Riv25]
ATGTTAAGCTTTCTACGCCTCAAGAAGCCCACCAATGCCATCAGCGACAACGAGCGGAGCAAATACAGTGCTGAAGAGAT
GGCGGCTGCCTTTCCAAAAGCTCCTTCGTTGGATGATGCTCCAGACCAAGAGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTTTACAGAGCTAGCAATCTCCACTGGCGACGACACA
TCGGGGGCGAGTACCCCAACTGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCGCGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCGTTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCCATAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCACGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACCACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGTATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCACCGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAGATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGTACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTTGTCTTGTGGTAACCAAGCTCGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (189-390)

• SRP54-type protein, helical bundle domain (SRP54_N) (105-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	41.551	90.932	0.378