Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LXM91_RS19295 Genome accession   NZ_CP090477
Coordinates   3917699..3918493 (-) Length   264 a.a.
NCBI ID   WP_007407895.1    Uniprot ID   A7ZAN9
Organism   Bacillus amyloliquefaciens strain W0101     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3912699..3923493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM91_RS19275 (LXM91_19275) - 3913063..3914070 (-) 1008 WP_031379194.1 ThiF family adenylyltransferase -
  LXM91_RS19280 (LXM91_19280) - 3914302..3915720 (-) 1419 WP_039253191.1 HAMP domain-containing sensor histidine kinase -
  LXM91_RS19285 (LXM91_19285) - 3915717..3915926 (-) 210 WP_015418611.1 winged helix-turn-helix domain-containing protein -
  LXM91_RS19290 (LXM91_19290) htrA 3916416..3917612 (-) 1197 WP_007614967.1 S1C family serine protease Regulator
  LXM91_RS19295 (LXM91_19295) vicX 3917699..3918493 (-) 795 WP_007407895.1 MBL fold metallo-hydrolase Regulator
  LXM91_RS19300 (LXM91_19300) yycI 3918508..3919347 (-) 840 WP_031379196.1 two-component system regulatory protein YycI -
  LXM91_RS19305 (LXM91_19305) yycH 3919334..3920692 (-) 1359 WP_015418614.1 two-component system activity regulator YycH -
  LXM91_RS19310 (LXM91_19310) walK 3920682..3922517 (-) 1836 WP_004393106.1 cell wall metabolism sensor histidine kinase WalK -
  LXM91_RS19315 (LXM91_19315) walR 3922524..3923231 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29116.20 Da        Isoelectric Point: 6.0280

>NTDB_id=554334 LXM91_RS19295 WP_007407895.1 3917699..3918493(-) (vicX) [Bacillus amyloliquefaciens strain W0101]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMEKIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=554334 LXM91_RS19295 WP_007407895.1 3917699..3918493(-) (vicX) [Bacillus amyloliquefaciens strain W0101]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCACTCTTTTCT
GGTGGATGCCGGCCTGAGCGGTAAAGCGATGGACGGGCTGATGGAGAAAATCGGCCGCAAGATAGACGACGTCGACGGCA
TCTTTGTCACTCACGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGACTTCCCGTCTACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGATACCGGACAAAAGTTTTTGTTCCCGATGGAAAG
CGTAAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCCCATGACGCGGCCGAGCCGATGTTTTATGTTTTCC
ACTACCAAGGCAGAAAGCTCGCGCTGATGACGGACACCGGGTATGTGAGCGACAGAATGAAAGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGATGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCCAATGAAGACGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCGCGCA
TCTATTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCCGGGGAAACGTTTCAGTTATTTGATACCGATCCGAAAATCCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7ZAN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527