Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   J6600_RS19470 Genome accession   NZ_CP072563
Coordinates   348618..348782 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus sp. LJBV19     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 343618..353782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6600_RS19465 srfAB 345509..348601 (+) 3093 Protein_311 surfactin non-ribosomal peptide synthetase SrfAB -
  J6600_RS19470 comS 348618..348782 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=554270 J6600_RS19470 WP_269194677.1 348618..348782(+) (comS) [Bacillus sp. LJBV19]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=554270 J6600_RS19470 WP_269194677.1 348618..348782(+) (comS) [Bacillus sp. LJBV19]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5