Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LXM91_RS07090 Genome accession   NZ_CP090477
Coordinates   1346135..1346599 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A7Z418
Organism   Bacillus amyloliquefaciens strain W0101     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1341135..1351599
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXM91_RS07070 (LXM91_07070) - 1342171..1343340 (-) 1170 WP_007611083.1 aminotransferase A -
  LXM91_RS07075 (LXM91_07075) - 1343541..1343702 (-) 162 WP_007409608.1 hypothetical protein -
  LXM91_RS07080 (LXM91_07080) cheV 1343891..1344802 (+) 912 WP_039251615.1 chemotaxis protein CheV -
  LXM91_RS07085 (LXM91_07085) - 1344915..1346065 (+) 1151 Protein_1340 IS3 family transposase -
  LXM91_RS07090 (LXM91_07090) kre 1346135..1346599 (-) 465 WP_003154622.1 YkyB family protein Regulator
  LXM91_RS07095 (LXM91_07095) - 1346722..1348014 (-) 1293 WP_015239757.1 MFS transporter -
  LXM91_RS07100 (LXM91_07100) - 1348090..1348584 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  LXM91_RS07105 (LXM91_07105) - 1348659..1349522 (-) 864 WP_039251611.1 metallophosphoesterase -
  LXM91_RS07110 (LXM91_07110) fadH 1349667..1350431 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  LXM91_RS07115 (LXM91_07115) - 1350545..1351093 (+) 549 WP_031378778.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=554244 LXM91_RS07090 WP_003154622.1 1346135..1346599(-) (kre) [Bacillus amyloliquefaciens strain W0101]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=554244 LXM91_RS07090 WP_003154622.1 1346135..1346599(-) (kre) [Bacillus amyloliquefaciens strain W0101]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterProScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z418

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929