Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   J6600_RS11570 Genome accession   NZ_CP072563
Coordinates   2436245..2437975 (-) Length   576 a.a.
NCBI ID   WP_007408359.1    Uniprot ID   I2C7K7
Organism   Bacillus sp. LJBV19     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2431245..2442975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6600_RS11545 (J6600_11545) - 2431664..2431876 (+) 213 WP_029973891.1 spore germination protein -
  J6600_RS11550 (J6600_11550) - 2432002..2432214 (+) 213 WP_014418351.1 spore germination protein -
  J6600_RS11555 (J6600_11555) alr 2432391..2433572 (+) 1182 WP_017418123.1 alanine racemase -
  J6600_RS11560 (J6600_11560) spo0A 2433720..2434520 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  J6600_RS11565 (J6600_11565) spoIVB 2434801..2436081 (-) 1281 WP_209387423.1 SpoIVB peptidase -
  J6600_RS11570 (J6600_11570) recN 2436245..2437975 (-) 1731 WP_007408359.1 DNA repair protein RecN Machinery gene
  J6600_RS11575 (J6600_11575) argR 2438007..2438456 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  J6600_RS11580 (J6600_11580) - 2438553..2439398 (-) 846 WP_209387424.1 TlyA family RNA methyltransferase -
  J6600_RS11585 (J6600_11585) dxs 2439395..2441296 (-) 1902 WP_022552977.1 1-deoxy-D-xylulose-5-phosphate synthase -
  J6600_RS11590 (J6600_11590) - 2441440..2442330 (-) 891 WP_007408353.1 polyprenyl synthetase family protein -
  J6600_RS11595 (J6600_11595) - 2442320..2442574 (-) 255 WP_007408352.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64079.91 Da        Isoelectric Point: 4.7628

>NTDB_id=554233 J6600_RS11570 WP_007408359.1 2436245..2437975(-) (recN) [Bacillus sp. LJBV19]
MLAELSIKNFAIIEELTISFERGLTVLTGETGAGKSIIIDAVSLLVGGRGSSEFVRYGETKAELEGLFLLDSGHPVFEVC
REQGIDASDDMIVMRRDINAGGKSVCRVNGKLVTIAALREIGRLLLDIHGQHDNQLLMEDDKHLELLDRFAGAEAESALQ
AYHEGYERYMKLLKKVKKLSESEQEMAHRLDLIQFQLEEIESAKLELNEDELLQEERKQISNFEKIYESLQNAYNALRSE
QGGLDWVGMASAQLEDISDINEPLQKLSESVSSSYYLLEDATFQMRNLLDDLEYDPERLNFIETRLNEIKQLKRKYGATV
EDILEYGSKIEEEIDQIENRDSHLEALKKELESVGKDVAVEAANLSKIRKAWAKKLAEAIHQELKSLYMGKSTFDTEFLV
KTDPSASEAPVVNGQPVQLTQKGIDLVKFLISTNTGEPLKPLSKVASGGELSRVMLAMKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSTGSQVLCITHLPQVAAMADTHLLIAKEFKDGRTTTHVTPLSKQDKVAEIGRMIAGVEVTDLTKR
HAQELLKQAGQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=554233 J6600_RS11570 WP_007408359.1 2436245..2437975(-) (recN) [Bacillus sp. LJBV19]
TTGTTAGCTGAACTATCAATAAAAAACTTTGCCATTATAGAGGAACTGACGATTTCGTTTGAGCGGGGGCTCACCGTCCT
GACGGGAGAAACAGGGGCCGGCAAGTCAATTATTATAGACGCCGTTTCCCTATTAGTCGGCGGCCGCGGCTCGTCTGAAT
TTGTCCGTTACGGTGAAACAAAGGCCGAGCTTGAAGGACTGTTTCTTTTGGACAGCGGTCATCCCGTTTTTGAAGTATGC
CGTGAGCAGGGAATAGACGCATCTGACGACATGATTGTCATGAGAAGGGACATTAATGCCGGAGGAAAAAGCGTCTGCCG
TGTCAACGGAAAATTAGTGACGATTGCGGCTTTAAGGGAGATCGGCAGACTTTTATTAGATATTCACGGACAGCATGATA
ACCAGCTGTTAATGGAGGACGATAAACACTTAGAGCTGTTGGACAGGTTTGCGGGCGCTGAGGCCGAATCCGCGCTTCAG
GCTTACCATGAAGGCTATGAGCGTTATATGAAGCTGCTCAAAAAAGTGAAGAAGCTGTCAGAAAGCGAGCAGGAAATGGC
GCATCGGTTAGACCTGATTCAATTTCAGCTTGAAGAAATCGAGTCGGCGAAGCTTGAATTGAATGAAGACGAGCTTCTTC
AGGAAGAGCGGAAGCAGATATCCAACTTTGAAAAAATTTATGAATCATTGCAAAACGCCTATAATGCGCTCCGCAGCGAG
CAGGGGGGGCTTGACTGGGTCGGAATGGCCTCTGCCCAGCTTGAAGATATTTCGGATATCAATGAACCGCTGCAAAAGCT
GTCAGAAAGTGTGTCAAGTTCCTATTATCTGCTGGAGGATGCCACCTTTCAGATGCGCAATCTGTTAGATGATCTGGAAT
ATGACCCGGAACGGCTGAATTTTATTGAAACCCGTTTAAATGAGATCAAACAGCTGAAGCGCAAATACGGAGCGACGGTA
GAAGACATTTTGGAATACGGCTCCAAAATAGAAGAGGAAATCGATCAAATCGAGAACCGCGACAGCCACCTTGAAGCGCT
GAAGAAGGAACTGGAGTCGGTCGGCAAAGATGTGGCCGTAGAAGCCGCCAATTTATCAAAAATCAGAAAAGCTTGGGCTA
AGAAACTGGCGGAAGCGATTCATCAGGAATTAAAAAGTCTGTATATGGGCAAATCAACGTTTGATACGGAATTTCTCGTG
AAAACCGATCCGTCAGCAAGTGAAGCACCGGTTGTCAACGGGCAGCCCGTGCAGCTTACCCAAAAGGGGATTGACCTTGT
GAAGTTTTTAATTTCAACAAACACCGGTGAGCCTTTAAAACCGCTGTCAAAGGTCGCGTCCGGAGGCGAGCTTTCACGGG
TGATGCTGGCGATGAAGAGTATTTTTTCTTCCCAGCAGGATGTCACCTCCATCATCTTTGACGAAGTGGACACCGGTGTA
AGCGGGCGGGTTGCCCAAGCCATCGCGGAAAAAATCCATAAAGTATCGACCGGTTCACAGGTGCTCTGCATTACACACCT
GCCGCAGGTTGCCGCCATGGCGGATACGCACCTTCTGATCGCAAAAGAATTCAAAGACGGCCGGACGACAACGCATGTCA
CGCCGCTTTCCAAACAGGACAAGGTAGCGGAAATCGGCCGCATGATTGCGGGCGTTGAAGTGACCGATCTGACAAAACGG
CATGCACAAGAGCTTTTAAAACAGGCCGGACAGGTAAAAACGACAGGATAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-230)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

88.715

100

0.887